Gm44756 Gene Detail

Summary

• Symbol
  Gm44756
• Name
  predicted gene 44756

• Feature Type
  lncRNA gene
• IDs
  MGI:5753332
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr7:43587481-43625997 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  1898 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753332	lncRNA gene	Chr7:43587481-43625997 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0004450	antisense lncRNA gene	Chr7:43990374-44037144 (-)
A/J	MGP_AJ_G0004429	antisense lncRNA gene	Chr7:43069786-43159559 (-)
AKR/J	MGP_AKRJ_G0004412	antisense lncRNA gene	Chr7:44464126-44505547 (-)
BALB/cJ	MGP_BALBcJ_G0004414	antisense lncRNA gene	Chr7:43190931-43322773 (-)
C3H/HeJ	MGP_C3HHeJ_G0004364	antisense lncRNA gene	Chr7:44965012-45002611 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004565	antisense lncRNA gene	Chr7:46217434-46282402 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004020	antisense lncRNA gene	Chr7:45835512-45848890 (-)
CAST/EiJ	MGP_CASTEiJ_G0004324	antisense lncRNA gene	Chr7:36164087-36307205 (-)
CBA/J	MGP_CBAJ_G0004358	antisense lncRNA gene	Chr7:47676046-47724647 (-)
DBA/2J	MGP_DBA2J_G0004372	antisense lncRNA gene	Chr7:42877061-42921580 (-)
FVB/NJ	MGP_FVBNJ_G0004390	antisense lncRNA gene	Chr7:42587818-42622014 (-)
LP/J	MGP_LPJ_G0004453	antisense lncRNA gene	Chr7:44733377-44776614 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004381	antisense lncRNA gene	Chr7:46595635-46640484 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004563	antisense lncRNA gene	Chr7:43585808-43635178 (-)
PWK/PhJ	MGP_PWKPhJ_G0004277	antisense lncRNA gene	Chr7:36337231-36586380 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0004218	antisense lncRNA gene	Chr7:31624337-31994778 (-)
WSB/EiJ	MGP_WSBEiJ_G0004363	antisense lncRNA gene	Chr7:44145369-44448320 (-)

Homology

• Gene Tree
  Gm44756
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108432 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108432	Ensembl Gene Model | MGI Sequence Detail	38517	C57BL/6J
transcript	ENSMUST00000206172	Ensembl | MGI Sequence Detail	1069	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm44756:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr72175	Chr7:43603503-43603522 (-)	22,484 bp
Tssr72174	Chr7:43603391-43603425 (-)	22,589 bp