Gm44818 Gene Detail

Summary

• Symbol
  Gm44818
• Name
  predicted gene 44818

• Feature Type
  lncRNA gene
• IDs
  MGI:5753394
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:43210743-43211100 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  114 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753394	lncRNA gene	Chr7:43210743-43211100 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007168	lincRNA gene	Chr7:43583873-43584230 (+)
A/J	MGP_AJ_G0007164	lincRNA gene	Chr7:42688271-42688628 (+)
AKR/J	MGP_AKRJ_G0007134	lincRNA gene	Chr7:44064425-44064782 (+)
BALB/cJ	MGP_BALBcJ_G0007143	lincRNA gene	Chr7:42804739-42805096 (+)
C3H/HeJ	MGP_C3HHeJ_G0007086	lincRNA gene	Chr7:44563926-44564283 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007311	lincRNA gene	Chr7:45783790-45784147 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006524	lincRNA gene	Chr7:44810106-44810467 (+)
CAST/EiJ	MGP_CASTEiJ_G0006990	lincRNA gene	Chr7:35736212-35736583 (+)
CBA/J	MGP_CBAJ_G0007069	lincRNA gene	Chr7:47232268-47232625 (+)
DBA/2J	MGP_DBA2J_G0007090	lincRNA gene	Chr7:42492360-42492713 (+)
FVB/NJ	MGP_FVBNJ_G0007113	lincRNA gene	Chr7:42206833-42207190 (+)
LP/J	MGP_LPJ_G0007172	lincRNA gene	Chr7:44314065-44314422 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007091	lincRNA gene	Chr7:46172743-46173100 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007315	lincRNA gene	Chr7:43192443-43192800 (+)
PWK/PhJ	MGP_PWKPhJ_G0006932	lincRNA gene	Chr7:35935924-35936278 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006842	lincRNA gene	Chr7:31234842-31235209 (+)
WSB/EiJ	MGP_WSBEiJ_G0007050	lincRNA gene	Chr7:43733168-43733525 (+)

Homology

• Gene Tree
  Gm44818
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108411 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108411	Ensembl Gene Model | MGI Sequence Detail	358	C57BL/6J
transcript	ENSMUST00000206608	Ensembl | MGI Sequence Detail	358	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;