Gm44878 Gene Detail

Summary

• Symbol
  Gm44878
• Name
  predicted gene 44878

• Feature Type
  unclassified gene
• IDs
  MGI:5753454
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr7:4661653-4662962 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  101 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753454	unclassified gene	Chr7:4661653-4662962 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002130	unclassified gene	Chr7:1576148-1577442 (+)
A/J	MGP_AJ_G0002105	unclassified gene	Chr7:1590336-1591630 (+)
AKR/J	MGP_AKRJ_G0002092	unclassified gene	Chr7:1650921-1652215 (+)
BALB/cJ	MGP_BALBcJ_G0002102	unclassified gene	Chr7:1632367-1633661 (+)
C3H/HeJ	MGP_C3HHeJ_G0002078	unclassified gene	Chr7:1629080-1630374 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002226	unclassified gene	Chr7:1636870-1638164 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001849	unclassified gene	Chr7:1343655-1344951 (+)
CAST/EiJ	MGP_CASTEiJ_G0002045	unclassified gene	Chr7:1566983-1568277 (+)
CBA/J	MGP_CBAJ_G0002072	unclassified gene	Chr7:1828855-1830149 (+)
DBA/2J	MGP_DBA2J_G0002077	unclassified gene	Chr7:1572693-1573987 (+)
FVB/NJ	MGP_FVBNJ_G0002086	unclassified gene	Chr7:1536197-1537491 (+)
LP/J	MGP_LPJ_G0002130	unclassified gene	Chr7:1691470-1692764 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002061	unclassified gene	Chr7:1765137-1766431 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002215	unclassified gene	Chr7:1564974-1566268 (+)
PWK/PhJ	MGP_PWKPhJ_G0002006	unclassified gene	Chr7:1739019-1740313 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001967	unclassified gene	Chr7:1618520-1619813 (+)
WSB/EiJ	MGP_WSBEiJ_G0002070	unclassified gene	Chr7:1580611-1581905 (+)

Homology

• Gene Tree
  Gm44878
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000108477 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108477	Ensembl Gene Model | MGI Sequence Detail	1310	C57BL/6J

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm44878:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr64340	Chr7:4660811-4660813 (+)	-841 bp
Tssr64341	Chr7:4661646-4661675 (+)	8 bp