Gm44879 Pseudogene Detail

Summary

• Symbol
  Gm44879
• Name
  predicted gene 44879

• Feature Type
  pseudogene
• IDs
  MGI:5753455
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:76948242-76948744 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  134 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753455	pseudogene	Chr7:76948242-76948744 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013940	pseudogene	Chr7:79068344-79068846 (-)
A/J	MGP_AJ_G0013958	pseudogene	Chr7:77273118-77273620 (-)
AKR/J	MGP_AKRJ_G0013892	pseudogene	Chr7:78919466-78919968 (-)
BALB/cJ	MGP_BALBcJ_G0013915	pseudogene	Chr7:77000962-77001464 (-)
C3H/HeJ	MGP_C3HHeJ_G0013750	pseudogene	Chr7:79581782-79582284 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014349	pseudogene	Chr7:82258706-82259208 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012197	pseudogene	Chr7:79901925-79902428 (-)
CAST/EiJ	MGP_CASTEiJ_G0013408	pseudogene	Chr7:70464308-70464810 (-)
CBA/J	MGP_CBAJ_G0013730	pseudogene	Chr7:84941140-84941642 (-)
DBA/2J	MGP_DBA2J_G0013809	pseudogene	Chr7:75846786-75847288 (-)
FVB/NJ	MGP_FVBNJ_G0013810	pseudogene	Chr7:75808483-75808985 (-)
LP/J	MGP_LPJ_G0013884	pseudogene	Chr7:80313093-80313595 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013836	pseudogene	Chr7:85176058-85176560 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014308	pseudogene	Chr7:78393834-78394336 (-)
PWK/PhJ	MGP_PWKPhJ_G0013222	pseudogene	Chr7:69025780-69026282 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012987	pseudogene	Chr7:65361284-65361795 (-)
WSB/EiJ	MGP_WSBEiJ_G0013471	pseudogene	Chr7:78700609-78701111 (-)

Homology

• Gene Tree
  Gm44879
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108611 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108611	Ensembl Gene Model | MGI Sequence Detail	503	C57BL/6J
transcript	ENSMUST00000207007	Ensembl | MGI Sequence Detail	503	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;