Gm44920 Gene Detail

Summary

• Symbol
  Gm44920
• Name
  predicted gene 44920

• Feature Type
  lncRNA gene
• IDs
  MGI:5753496
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:3594645-3607149 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  557 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753496	lncRNA gene	Chr7:3594645-3607149 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0007114	lincRNA gene	Chr7:516945-529622 (-)
A/J	MGP_AJ_G0007111	lincRNA gene	Chr7:455033-468065 (-)
AKR/J	MGP_AKRJ_G0007079	lincRNA gene	Chr7:471507-486213 (-)
BALB/cJ	MGP_BALBcJ_G0007086	lincRNA gene	Chr7:468038-480853 (-)
C3H/HeJ	MGP_C3HHeJ_G0007031	lincRNA gene	Chr7:474120-487124 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0007252	lincRNA gene	Chr7:487295-500599 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006477	lincRNA gene	Chr7:356252-367704 (-)
CAST/EiJ	MGP_CASTEiJ_G0006937	lincRNA gene	Chr7:469494-488007 (-)
CBA/J	MGP_CBAJ_G0007012	lincRNA gene	Chr7:606051-622383 (-)
DBA/2J	MGP_DBA2J_G0007034	lincRNA gene	Chr7:452125-465637 (-)
FVB/NJ	MGP_FVBNJ_G0007057	lincRNA gene	Chr7:446694-459681 (-)
LP/J	MGP_LPJ_G0007117	lincRNA gene	Chr7:517591-536357 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007037	lincRNA gene	Chr7:516479-530343 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007258	lincRNA gene	Chr7:461186-474409 (-)
PWK/PhJ	MGP_PWKPhJ_G0006881	lincRNA gene	Chr7:599840-612074 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0006791	lincRNA gene	Chr7:529460-544068 (-)
WSB/EiJ	MGP_WSBEiJ_G0006998	lincRNA gene	Chr7:462650-476156 (-)

Homology

• Gene Tree
  Gm44920
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108644 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108644	Ensembl Gene Model | MGI Sequence Detail	12505	C57BL/6J
transcript	ENSMUST00000206503	Ensembl | MGI Sequence Detail	746	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;