Gm44977 Pseudogene Detail

Summary

• Symbol
  Gm44977
• Name
  predicted gene 44977

• Feature Type
  pseudogene
• IDs
  MGI:5753553
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:56505180-56505599 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  157 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753553	pseudogene	Chr7:56505180-56505599 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013913	pseudogene	Chr7:57659955-57660374 (-)
A/J	MGP_AJ_G0013932	pseudogene	Chr7:56792667-56793086 (-)
AKR/J	MGP_AKRJ_G0013866	pseudogene	Chr7:58113187-58113606 (-)
BALB/cJ	MGP_BALBcJ_G0013889	pseudogene	Chr7:56387217-56387642 (-)
C3H/HeJ	MGP_C3HHeJ_G0013725	pseudogene	Chr7:58454170-58454589 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014324	pseudogene	Chr7:60273109-60273528 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012177	pseudogene	Chr7:59412167-59412593 (-)
CAST/EiJ	MGP_CASTEiJ_G0013387	pseudogene	Chr7:49651311-49651734 (-)
CBA/J	MGP_CBAJ_G0013707	pseudogene	Chr7:62375175-62375594 (-)
DBA/2J	MGP_DBA2J_G0013785	pseudogene	Chr7:55811438-55811863 (-)
FVB/NJ	MGP_FVBNJ_G0013786	pseudogene	Chr7:55739234-55739653 (-)
LP/J	MGP_LPJ_G0013857	pseudogene	Chr7:58758980-58759399 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013812	pseudogene	Chr7:61931668-61932087 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014280	pseudogene	Chr7:57104759-57105178 (-)
PWK/PhJ	MGP_PWKPhJ_G0013200	pseudogene	Chr7:49055822-49056245 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012966	pseudogene	Chr7:45161464-45161894 (-)
WSB/EiJ	MGP_WSBEiJ_G0013449	pseudogene	Chr7:57731433-57731858 (-)

Homology

• Gene Tree
  Gm44977
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108450 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108450	Ensembl Gene Model | MGI Sequence Detail	420	C57BL/6J
transcript	ENSMUST00000205283	Ensembl | MGI Sequence Detail	420	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;