Gm45013 Pseudogene Detail

Summary

• Symbol
  Gm45013
• Name
  predicted gene 45013

• Feature Type
  pseudogene
• IDs
  MGI:5753589
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:4362598-4362775 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753589	pseudogene	Chr7:4362598-4362775 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013791	pseudogene	Chr7:1277207-1277384 (+)
A/J	MGP_AJ_G0013787	pseudogene	Chr7:1284725-1284902 (+)
AKR/J	MGP_AKRJ_G0013740	pseudogene	Chr7:1353173-1353350 (+)
BALB/cJ	MGP_BALBcJ_G0013769	pseudogene	Chr7:1351318-1351495 (+)
C3H/HeJ	MGP_C3HHeJ_G0013595	pseudogene	Chr7:1314573-1314750 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014162	pseudogene	Chr7:1291774-1291951 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012102	pseudogene	Chr7:1053275-1053452 (+)
CAST/EiJ	MGP_CASTEiJ_G0013279	pseudogene	Chr7:1261188-1261365 (+)
CBA/J	MGP_CBAJ_G0013572	pseudogene	Chr7:1508108-1508285 (+)
DBA/2J	MGP_DBA2J_G0013653	pseudogene	Chr7:1255122-1255299 (+)
FVB/NJ	MGP_FVBNJ_G0013652	pseudogene	Chr7:1223811-1223988 (+)
LP/J	MGP_LPJ_G0013736	pseudogene	Chr7:1372832-1373009 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013667	pseudogene	Chr7:1429957-1430134 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014143	pseudogene	Chr7:1255715-1255892 (+)
PWK/PhJ	MGP_PWKPhJ_G0013092	pseudogene	Chr7:1423889-1424066 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012870	pseudogene	Chr7:1315040-1315217 (+)
WSB/EiJ	MGP_WSBEiJ_G0013338	pseudogene	Chr7:1267727-1267904 (+)

Homology

• Gene Tree
  Gm45013
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108667 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108667	Ensembl Gene Model | MGI Sequence Detail	178	C57BL/6J
transcript	ENSMUST00000206883	Ensembl | MGI Sequence Detail	178	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;