Gm45092 Gene Detail

Summary

• Symbol
  Gm45092
• Name
  predicted gene 45092

• Feature Type
  lncRNA gene
• IDs
  MGI:5753668
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:124506832-124513641 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  336 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753668	lncRNA gene	Chr7:124506832-124513641 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007264	lincRNA gene	Chr7:129106688-129113160 (+)
A/J	MGP_AJ_G0007261	lincRNA gene	Chr7:125728936-125736202 (+)
AKR/J	MGP_AKRJ_G0007231	lincRNA gene	Chr7:128925026-128931513 (+)
BALB/cJ	MGP_BALBcJ_G0007239	lincRNA gene	Chr7:125382547-125389749 (+)
C3H/HeJ	MGP_C3HHeJ_G0007183	lincRNA gene	Chr7:128818017-128825246 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007409	lincRNA gene	Chr7:134163036-134169502 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006615	lincRNA gene	Chr7:126949880-126957881 (+)
CAST/EiJ	MGP_CASTEiJ_G0007085	lincRNA gene	Chr7:120626709-120633247 (+)
CBA/J	MGP_CBAJ_G0007166	lincRNA gene	Chr7:138654376-138660875 (+)
DBA/2J	MGP_DBA2J_G0007187	lincRNA gene	Chr7:123698990-123705419 (+)
FVB/NJ	MGP_FVBNJ_G0007209	lincRNA gene	Chr7:123550217-123556647 (+)
LP/J	MGP_LPJ_G0007269	lincRNA gene	Chr7:130560185-130566659 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007186	lincRNA gene	Chr7:139930110-139937745 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007412	lincRNA gene	Chr7:127885246-127891688 (+)
PWK/PhJ	MGP_PWKPhJ_G0007027	lincRNA gene	Chr7:116679477-116686283 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006936	lincRNA gene	Chr7:114736008-114743811 (+)
WSB/EiJ	MGP_WSBEiJ_G0007146	lincRNA gene	Chr7:128875451-128883259 (+)

Homology

• Gene Tree
  Gm45092
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108623 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108623	Ensembl Gene Model | MGI Sequence Detail	6810	C57BL/6J
transcript	ENSMUST00000205944	Ensembl | MGI Sequence Detail	545	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;