Gm45095 Gene Detail

Summary

• Symbol
  Gm45095
• Name
  predicted gene 45095

• Feature Type
  lncRNA gene
  BioType Conflict
  
• IDs
  MGI:5753671
  NCBI Gene: 115486510
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:34755452-34755804 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  78 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753671	lncRNA gene	Chr7:34750356-34757070 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004443	antisense lncRNA gene	Chr7:34404810-34405162 (+)
A/J	MGP_AJ_G0004422	antisense lncRNA gene	Chr7:33502133-33502485 (+)
AKR/J	MGP_AKRJ_G0004404	antisense lncRNA gene	Chr7:34304735-34305087 (+)
BALB/cJ	MGP_BALBcJ_G0004407	antisense lncRNA gene	Chr7:33798734-33799086 (+)
C3H/HeJ	MGP_C3HHeJ_G0004357	antisense lncRNA gene	Chr7:35199313-35199665 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004557	antisense lncRNA gene	Chr7:36108851-36109203 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004013	antisense lncRNA gene	Chr7:34225483-34225836 (+)
CAST/EiJ	MGP_CASTEiJ_G0004317	antisense lncRNA gene	Chr7:26336420-26336772 (+)
CBA/J	MGP_CBAJ_G0004351	antisense lncRNA gene	Chr7:37243999-37244351 (+)
DBA/2J	MGP_DBA2J_G0004365	antisense lncRNA gene	Chr7:33346779-33347131 (+)
FVB/NJ	MGP_FVBNJ_G0004383	antisense lncRNA gene	Chr7:33276693-33277045 (+)
LP/J	MGP_LPJ_G0004446	antisense lncRNA gene	Chr7:34741827-34742179 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004374	antisense lncRNA gene	Chr7:36264467-36264895 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004555	antisense lncRNA gene	Chr7:33841448-33841800 (+)
PWK/PhJ	MGP_PWKPhJ_G0004270	antisense lncRNA gene	Chr7:26675364-26675715 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004211	antisense lncRNA gene	Chr7:23424080-23424432 (+)
WSB/EiJ	MGP_WSBEiJ_G0004356	antisense lncRNA gene	Chr7:34396232-34396584 (+)

Homology

• Gene Tree
  Gm45095
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000108333 (Evidence)
• NCBI Gene
  115486510

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108333	Ensembl Gene Model | MGI Sequence Detail	353	C57BL/6J
transcript	ENSMUST00000206736	Ensembl | MGI Sequence Detail	254	Not Applicable
polypeptide	XP_030099013	RefSeq | MGI Sequence Detail	217	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;