Gm45169 Gene Detail

Summary

• Symbol
  Gm45169
• Name
  predicted gene 45169

• Feature Type
  lncRNA gene
• IDs
  MGI:5753745
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:79236396-79242361 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  245 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753745	lncRNA gene	Chr7:79236396-79242361 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0007225	lincRNA gene	Chr7:81480380-81486207 (-)
A/J	MGP_AJ_G0007222	lincRNA gene	Chr7:79598485-79604432 (-)
AKR/J	MGP_AKRJ_G0007192	lincRNA gene	Chr7:81300332-81306128 (-)
BALB/cJ	MGP_BALBcJ_G0007200	lincRNA gene	Chr7:79292018-79297835 (-)
C3H/HeJ	MGP_C3HHeJ_G0007144	lincRNA gene	Chr7:81965917-81971729 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0007370	lincRNA gene	Chr7:84677498-84683262 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006578	lincRNA gene	Chr7:82139951-82145576 (-)
CAST/EiJ	MGP_CASTEiJ_G0007046	lincRNA gene	Chr7:72839004-72844615 (-)
CBA/J	MGP_CBAJ_G0007127	lincRNA gene	Chr7:87510846-87518270 (-)
DBA/2J	MGP_DBA2J_G0007148	lincRNA gene	Chr7:78170620-78176390 (-)
FVB/NJ	MGP_FVBNJ_G0007171	lincRNA gene	Chr7:78084032-78089631 (-)
LP/J	MGP_LPJ_G0007230	lincRNA gene	Chr7:82732137-82737730 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007147	lincRNA gene	Chr7:87693620-87699447 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007373	lincRNA gene	Chr7:80753746-80759341 (-)
PWK/PhJ	MGP_PWKPhJ_G0006989	lincRNA gene	Chr7:71339920-71346239 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0006897	lincRNA gene	Chr7:67747916-67753457 (-)
WSB/EiJ	MGP_WSBEiJ_G0007107	lincRNA gene	Chr7:81081699-81087294 (-)

Homology

• Gene Tree
  Gm45169
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108776 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108776	Ensembl Gene Model | MGI Sequence Detail	5966	C57BL/6J
transcript	ENSMUST00000205717	Ensembl | MGI Sequence Detail	639	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;