Gm45184 Gene Detail

Summary

• Symbol
  Gm45184
• Name
  predicted gene 45184

• Feature Type
  lncRNA gene
• IDs
  MGI:5753760
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:127033594-127038564 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  252 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753760	lncRNA gene	Chr7:127033594-127038564 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007276	lincRNA gene	Chr7:131783759-131788640 (+)
A/J	MGP_AJ_G0007273	lincRNA gene	Chr7:128285023-128289865 (+)
AKR/J	MGP_AKRJ_G0007243	lincRNA gene	Chr7:131585506-131590456 (+)
BALB/cJ	MGP_BALBcJ_G0007251	lincRNA gene	Chr7:127930003-127934899 (+)
C3H/HeJ	MGP_C3HHeJ_G0007195	lincRNA gene	Chr7:131481696-131486592 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007421	lincRNA gene	Chr7:136922499-136929077 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0007097	lincRNA gene	Chr7:123282230-123287135 (+)
CBA/J	MGP_CBAJ_G0007178	lincRNA gene	Chr7:141553113-141558008 (+)
DBA/2J	MGP_DBA2J_G0007199	lincRNA gene	Chr7:126259972-126264964 (+)
FVB/NJ	MGP_FVBNJ_G0007221	lincRNA gene	Chr7:126106084-126110950 (+)
LP/J	MGP_LPJ_G0007281	lincRNA gene	Chr7:133262935-133267821 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007198	lincRNA gene	Chr7:142664990-142670662 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007424	lincRNA gene	Chr7:130566415-130571299 (+)
PWK/PhJ	MGP_PWKPhJ_G0007039	lincRNA gene	Chr7:119264572-119269276 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0007158	lincRNA gene	Chr7:131549705-131554606 (+)

Homology

• Gene Tree
  Gm45184
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000108483 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108483	Ensembl Gene Model | MGI Sequence Detail	4971	C57BL/6J
transcript	ENSMUST00000206354	Ensembl | MGI Sequence Detail	955	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;