Gm45186 Pseudogene Detail

Summary

• Symbol
  Gm45186
• Name
  predicted gene 45186

• Feature Type
  pseudogene
• IDs
  MGI:5753762
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:97303483-97303960 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  76 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753762	pseudogene	Chr7:97303483-97303960 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013968	pseudogene	Chr7:100362416-100362893 (-)
A/J	MGP_AJ_G0013987	pseudogene	Chr7:97872011-97872488 (-)
AKR/J	MGP_AKRJ_G0013921	pseudogene	Chr7:100209114-100209591 (-)
BALB/cJ	MGP_BALBcJ_G0013943	pseudogene	Chr7:97563322-97563799 (-)
C3H/HeJ	MGP_C3HHeJ_G0013778	pseudogene	Chr7:100553821-100554299 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014376	pseudogene	Chr7:104272419-104272896 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012222	pseudogene	Chr7:100322217-100323567 (-)
CAST/EiJ	MGP_CASTEiJ_G0013436	pseudogene	Chr7:92078198-92078675 (-)
CBA/J	MGP_CBAJ_G0013756	pseudogene	Chr7:107783951-107784429 (-)
DBA/2J	MGP_DBA2J_G0013835	pseudogene	Chr7:96226624-96227102 (-)
FVB/NJ	MGP_FVBNJ_G0013839	pseudogene	Chr7:96021306-96021783 (-)
LP/J	MGP_LPJ_G0013910	pseudogene	Chr7:101681154-101681631 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013865	pseudogene	Chr7:109316720-109317197 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014337	pseudogene	Chr7:99490803-99491280 (-)
PWK/PhJ	MGP_PWKPhJ_G0013250	pseudogene	Chr7:89290825-89291303 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013016	pseudogene	Chr7:86729416-86729891 (-)
WSB/EiJ	MGP_WSBEiJ_G0013498	pseudogene	Chr7:100130863-100131340 (-)

Homology

• Gene Tree
  Gm45186
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108547 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108547	Ensembl Gene Model | MGI Sequence Detail	478	C57BL/6J
transcript	ENSMUST00000206874	Ensembl | MGI Sequence Detail	478	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;