Gm45226 Pseudogene Detail

Summary

• Symbol
  Gm45226
• Name
  predicted gene 45226

• Feature Type
  pseudogene
• IDs
  MGI:5753802
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:25509600-25509887 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  92 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753802	pseudogene	Chr7:25509600-25509887 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013847	pseudogene	Chr7:24327479-24327766 (+)
A/J	MGP_AJ_G0013845	pseudogene	Chr7:23689488-23689775 (+)
AKR/J	MGP_AKRJ_G0013793	pseudogene	Chr7:24303046-24303333 (+)
BALB/cJ	MGP_BALBcJ_G0013826	pseudogene	Chr7:23924961-23925248 (+)
C3H/HeJ	MGP_C3HHeJ_G0013649	pseudogene	Chr7:24710921-24711208 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014221	pseudogene	Chr7:25141410-25141697 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012130	pseudogene	Chr7:25025919-25026210 (+)
CAST/EiJ	MGP_CASTEiJ_G0013327	pseudogene	Chr7:18116431-18116717 (+)
CBA/J	MGP_CBAJ_G0013630	pseudogene	Chr7:26031255-26031542 (+)
DBA/2J	MGP_DBA2J_G0013707	pseudogene	Chr7:23580784-23581071 (+)
FVB/NJ	MGP_FVBNJ_G0013704	pseudogene	Chr7:23612274-23612561 (+)
LP/J	MGP_LPJ_G0013787	pseudogene	Chr7:24600500-24600787 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013722	pseudogene	Chr7:25748306-25748593 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014201	pseudogene	Chr7:23939227-23939514 (+)
PWK/PhJ	MGP_PWKPhJ_G0013138	pseudogene	Chr7:18541532-18541790 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012914	pseudogene	Chr7:15263914-15264210 (+)
WSB/EiJ	MGP_WSBEiJ_G0013386	pseudogene	Chr7:24160164-24160451 (+)

Homology

• Gene Tree
  Gm45226
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000108691 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108691	Ensembl Gene Model | MGI Sequence Detail	288	C57BL/6J
transcript	ENSMUST00000206602	Ensembl | MGI Sequence Detail	288	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;