Gm45227 Pseudogene Detail

Summary

• Symbol
  Gm45227
• Name
  predicted gene 45227

• Feature Type
  pseudogene
• IDs
  MGI:5753803
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:25649678-25649846 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  122 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5753803	pseudogene	Chr7:25649678-25649846 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013849	pseudogene	Chr7:24484307-24484475 (+)
A/J	MGP_AJ_G0013848	pseudogene	Chr7:23833183-23833351 (+)
AKR/J	MGP_AKRJ_G0013796	pseudogene	Chr7:24457955-24458123 (+)
BALB/cJ	MGP_BALBcJ_G0013828	pseudogene	Chr7:24070091-24070259 (+)
C3H/HeJ	MGP_C3HHeJ_G0013652	pseudogene	Chr7:24861063-24861231 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014224	pseudogene	Chr7:25307654-25307822 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0013329	pseudogene	Chr7:18281042-18281210 (+)
CBA/J	MGP_CBAJ_G0013633	pseudogene	Chr7:26203295-26203463 (+)
DBA/2J	MGP_DBA2J_G0013710	pseudogene	Chr7:23724364-23724532 (+)
FVB/NJ	MGP_FVBNJ_G0013707	pseudogene	Chr7:23761053-23761221 (+)
LP/J	MGP_LPJ_G0013790	pseudogene	Chr7:24764199-24764367 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013725	pseudogene	Chr7:25932839-25933007 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014204	pseudogene	Chr7:24098579-24098747 (+)
PWK/PhJ	MGP_PWKPhJ_G0013140	pseudogene	Chr7:18865831-18866078 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0013389	pseudogene	Chr7:24312764-24312932 (+)

Homology

• Gene Tree
  Gm45227
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm45227
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000108552 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108552	Ensembl Gene Model | MGI Sequence Detail	169	C57BL/6J
transcript	ENSMUST00000205585	Ensembl | MGI Sequence Detail	169	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:247967 Kumar R, et al., Compensatory changes in CYP expression in three different toxicology mouse models: CAR-null, Cyp3a-null, and Cyp2b9/10/13-null mice. PLoS One. 2017;12(3):e0174355
• Latest
  J:350361 Hamilton MC, et al., Increased toxicity and retention of perflourooctane sulfonate (PFOS) in humanized CYP2B6-Transgenic mice compared to Cyp2b-null mice is relieved by a high-fat diet (HFD). Food Chem Toxicol. 2021 Jun;152:112175