Krtap5-26 Gene Detail

Summary

• Symbol
  Krtap5-26
• Name
  keratin associated protein 5-26
• Synonyms
  Gm45618

• Feature Type
  protein coding gene
• IDs
  MGI:5791454
  NCBI Gene: 108167466
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:141673807-141674466 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  98 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5791454	protein coding gene	Chr7:141673352-141674637 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Human Ortholog
  KRTAP5-10, keratin associated protein 5-10

• Vertebrate Orthologs
  6

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  KRTAP5-10, keratin associated protein 5-10
  
• Synonyms
  KRTAP5.10
• Links
  HGNC:23605

  NCBI Gene ID: 387273

  neXtProt AC: NX_Q6L8G5

  UniProt: Q6L8G5

  
  
• Chr Location
  11q13.4; chr11:71565563-71566735 (+)  GRCh38

---

• Human Ortholog
  KRTAP5-11, keratin associated protein 5-11
  
• Synonyms
  KRTAP5.11, KRTAP5-5, KRTAP5-6
• Links
  HGNC:23606

  NCBI Gene ID: 440051

  neXtProt AC: NX_Q6L8G4

  UniProt: Q6L8G4

  
  
• Chr Location
  11q13.4

---

• Human Ortholog
  KRTAP5-2, keratin associated protein 5-2
  
• Synonyms
  KRTAP5.2, KRTAP5-8
• Links
  HGNC:23597

  NCBI Gene ID: 440021

  neXtProt AC: NX_Q701N4

  UniProt: Q701N4

  
  
• Chr Location
  11p15.5

---

• Human Ortholog
  KRTAP5-3, keratin associated protein 5-3
  
• Synonyms
  KRTAP5.3, KRTAP5-9
• Links
  HGNC:23598

  NCBI Gene ID: 387266

  neXtProt AC: NX_Q6L8H2

  UniProt: Q6L8H2

  
  
• Chr Location
  11p15.5; chr11:1607565-1608463 (-)  GRCh38

---

• Human Ortholog
  KRTAP5-7, keratin associated protein 5-7
  
• Synonyms
  KRTAP5-3, KRTAP5.7
• Links
  HGNC:23602

  NCBI Gene ID: 440050

  neXtProt AC: NX_Q6L8G8

  UniProt: Q6L8G8

  
  
• Chr Location
  11q13.4; chr11:71527267-71528669 (+)  GRCh38

---

• Human Ortholog
  KRTAP5-9, keratin associated protein 5-9
  
• Synonyms
  KRN1, KRTAP5-1, KRTAP5.9
• Links
  HGNC:23604

  NCBI Gene ID: 3846

  neXtProt AC: NX_P26371

  UniProt: P26371

  
  
• Chr Location
  11q13.4

---

• MGI Vertebrate Homology
  Krtap5-26 stringent orthology
  6 human;1 mouse
  
• HCOP
  vertebrate homology predictions: KRTAP5-10, KRTAP5-11, KRTAP5-2, KRTAP5-3, KRTAP5-7, KRTAP5-9
• Gene Tree
  Krtap5-26
  

Gene Ontology
(GO)
Classifications

• All GO Annotations
  1
• GO References
  1

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  10
• RefSeq
  2
• UniProt
  1
• CCDS
  CCDS85462.1

• Ensembl
  ENSMUSG00000109859 (Evidence)
• NCBI Gene
  108167466

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000109859	Ensembl Gene Model | MGI Sequence Detail	660	C57BL/6J
transcript	ENSMUST00000209890	Ensembl | MGI Sequence Detail	660	Not Applicable
polypeptide	ENSMUSP00000147854	Ensembl | MGI Sequence Detail	219	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

Other
Accession IDs

MGI:7580797

References

• Summaries
  All 9

  Gene Ontology 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:164563 The Gene Ontology Consortium, Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs. 2010 Oct;

TSS for Krtap5-26:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr75735	Chr7:141674528-141674532 (-)	-64 bp