Gm46319 Gene Detail

Summary

• Symbol
  Gm46319
• Name
  predicted gene, 46319

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:5825956
  NCBI Gene: 108167961
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr12:84265721-84266445 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5825956	protein coding gene	Chr12:84263205-84266445 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm46319
  

Sequences &
Gene Models

• All Sequences
  6
• RefSeq
  2

• Ensembl
  ENSMUSG00000128297 (Evidence)
• NCBI Gene
  108167961

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000128297	Ensembl Gene Model | MGI Sequence Detail	725	C57BL/6J
transcript	ENSMUST00000286699	Ensembl | MGI Sequence Detail	357	Not Applicable
polypeptide	XP_030102910	RefSeq | MGI Sequence Detail	379	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm46319:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr114327	Chr12:84264453-84264464 (+)	-1,262 bp
Tssr114328	Chr12:84265348-84265389 (+)	-352 bp