Gm47189 Gene Detail

Summary

• Symbol
  Gm47189
• Name
  predicted gene, 47189

• Feature Type
  protein coding gene
• IDs
  MGI:6095980
  NCBI Gene: 118027458
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:41489140-41494404 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  7 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6095980	protein coding gene	Chr14:41489129-41494404 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• MGI Vertebrate Homology
  Gm47189 stringent orthology
  1 mouse;1 rat
  
• Gene Tree
  Gm47189
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  8
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000114852 (Evidence)
• NCBI Gene
  118027458

Representative Sequences			Length	Strain/Species
genomic	118027458	NCBI Gene Model | MGI Sequence Detail	5265	C57BL/6J
transcript	NM_001384240	RefSeq | MGI Sequence Detail	879	ZRU/MplStud
polypeptide	NP_001371169	RefSeq | MGI Sequence Detail	184	ZRU/MplStud

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR006907 Disks large homolog 5, N-terminal

References

• Summaries
  All 4
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;