Krtap12-24 Gene Detail

Summary

• Symbol
  Krtap12-24
• Name
  keratin associated protein 12-24
• Synonyms
  Gm29802, Gm48180

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:5588961
  NCBI Gene: 101056229
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:77570675-77571027 bp, - strand

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  58 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5588961	protein coding gene	Chr10:77570675-77571027 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Human Ortholog
  KRTAP12-1, keratin associated protein 12-1

• Vertebrate Orthologs
  1

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  KRTAP12-1, keratin associated protein 12-1
  
• Synonyms
  KAP12.1, KRTAP12.1
• Links
  HGNC:20529

  NCBI Gene ID: 353332

  neXtProt AC: NX_P59990

  UniProt: P59990

  
  
• Chr Location
  21q22.3; chr21:44681576-44682163 (-)  GRCh38

---

• MGI Vertebrate Homology
  Krtap12-24 stringent orthology
  1 human;1 mouse
  
• HCOP
  vertebrate homology predictions: KRTAP12-1
• Gene Tree
  Krtap12-24
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Krtap12-24
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  6
• RefSeq
  2

• Ensembl
  ENSMUSG00000112236 (Evidence)
• NCBI Gene
  101056229

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112236	Ensembl Gene Model | MGI Sequence Detail	315	C57BL/6J
transcript	ENSMUST00000219191	Ensembl | MGI Sequence Detail	315	Not Applicable
polypeptide	NP_001365450	RefSeq | MGI Sequence Detail	104	C57BL/6

Other
Accession IDs

MGI:6097556, MGI:7593862

References

• Summaries
  All 10

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87

TSS for Krtap12-24:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr98242	Chr10:77571026-77571029 (-)	-1 bp