M6pr-ps Pseudogene Detail

Summary

• Symbol
  M6pr-ps
• Name
  mannose-6-phosphate receptor, pseudogene

• Feature Type
  pseudogene
• IDs
  MGI:96905
  NCBI Gene: 17114
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:99407866-99408695 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 43.10 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  13
• RFLP
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_96905	pseudogene	Chr3:99407486-99409932 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012310	pseudogene	Chr3:100608169-100608878 (+)
A/J	MGP_AJ_G0012304	pseudogene	Chr3:97384310-97385105 (+)
AKR/J	MGP_AKRJ_G0012270	pseudogene	Chr3:99731163-99733890 (+)
BALB/cJ	MGP_BALBcJ_G0012287	pseudogene	Chr3:97184192-97184896 (+)
C3H/HeJ	MGP_C3HHeJ_G0012152	pseudogene	Chr3:100066610-100067314 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012599	pseudogene	Chr3:104285266-104286095 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0012130	pseudogene	Chr3:107974560-107975264 (+)
DBA/2J	MGP_DBA2J_G0012186	pseudogene	Chr3:96658509-96659213 (+)
FVB/NJ	MGP_FVBNJ_G0012190	pseudogene	Chr3:94595269-94596098 (+)
LP/J	MGP_LPJ_G0012256	pseudogene	Chr3:101956412-101957121 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012193	pseudogene	Chr3:114084247-114085076 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012605	pseudogene	Chr3:99277922-99278751 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  M6pr-ps
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving M6pr-ps
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000080832 (Evidence)
• NCBI Gene
  17114

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000080832	Ensembl Gene Model | MGI Sequence Detail	830	C57BL/6J
transcript	ENSMUST00000120481	Ensembl | MGI Sequence Detail	830	Not Applicable

Molecular
Reagents

• All nucleic 2

  Genomic 1

  cDNA 1

Other
Accession IDs

MGD-MRK-12092

References

• Summaries
  All 9

  Diseases 1

  Phenotypes 4
• Earliest
  J:1218 Ludwig T, et al., Gene and pseudogene of the mouse cation-dependent mannose 6-phosphate receptor. Genomic organization, expression, and chromosomal localization. J Biol Chem. 1992 Jun 15;267(17):12211-9
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426