Rnu3b-ps3 Pseudogene Detail

Summary

• Symbol
  Rnu3b-ps3
• Name
  U3B small nuclear RNA pseudogene 3

• Feature Type
  pseudogene
• IDs
  MGI:97981
  NCBI Gene: 19854
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:102219632-102220044 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 51.45 cM, cytoband A3-B
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_97981	pseudogene	Chr12:102219632-102220044 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Sequences &
Gene Models

• All Sequences
  4
• RefSeq
  1

• NCBI Gene
  19854

Representative Sequences			Length	Strain/Species
genomic	19854	NCBI Gene Model | MGI Sequence Detail	413	C57BL/6J

Molecular
Reagents

• All nucleic 3

  Genomic 2

  Other 1

Other
Accession IDs

MGD-MRK-13983, MGD-MRK-13989

References

• Summaries
  All 5
• Earliest
  J:9826 Mazan S, et al., Mouse U3-RNA-processed pseudogenes are nonrandomly integrated into genomic DNA. Implications for the process of retrogene formation. Eur J Biochem. 1989 May 15;181(3):599-605
• Latest
  J:11033 Mazan S, et al., Composition and chromosomal localization of the small multigene family encoding mouse U3B nucleolar RNA. Cytogenet Cell Genet. 1991;56(1):18-22