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Rps16 Gene Detail
Summary
  • Symbol
    Rps16
  • Name
    ribosomal protein S16
  • Feature Type
    protein coding gene
  • IDs
    MGI:98118
    NCBI Gene: 20055
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:28050114-28052123 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 16.70 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    185 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_98118
 protein coding gene Chr7:28050077-28052580 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031940
 protein coding gene Chr7:27133387-27135431 (+)
A/J MGP_AJ_G0031919
 protein coding gene Chr7:26472638-26475275 (+)
AKR/J MGP_AKRJ_G0031850
 protein coding gene Chr7:27148287-27150423 (+)
BALB/cJ MGP_BALBcJ_G0031925
 protein coding gene Chr7:26632837-26634881 (+)
C3H/HeJ MGP_C3HHeJ_G0031647
 protein coding gene Chr7:27527456-27530601 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032390
 protein coding gene Chr7:28005053-28007097 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029442
 protein coding gene Chr7:27548282-27550336 (+)
CAST/EiJ MGP_CASTEiJ_G0030982
 protein coding gene Chr7:20834308-20836814 (+)
CBA/J MGP_CBAJ_G0031610
 protein coding gene Chr7:29273907-29275906 (+)
DBA/2J MGP_DBA2J_G0031763
 protein coding gene Chr7:26237228-26239272 (+)
FVB/NJ MGP_FVBNJ_G0031720
 protein coding gene Chr7:26305262-26307384 (+)
LP/J MGP_LPJ_G0031844
 protein coding gene Chr7:27455995-27458039 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031755
 protein coding gene Chr7:28764905-28766952 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032420
 protein coding gene Chr7:26634618-26637678 (+)
PWK/PhJ MGP_PWKPhJ_G0030705
 protein coding gene Chr7:21238122-21240451 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030540
 protein coding gene Chr7:17640548-17642596 (+)
WSB/EiJ MGP_WSBEiJ_G0031089
 protein coding gene Chr7:26964833-26966877 (+)



Homology
more
  • Human Ortholog
    RPS16, ribosomal protein S16
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RPS16, ribosomal protein S16
  • Synonyms
    S16, uS9
  • Links
    NCBI Gene ID: 6217
    neXtProt AC: NX_P62249
    UniProt: P62249

  • Chr Location
    19q13.2; chr19:39433137-39435949 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    31
  • GO References
    10
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    711
  • Tissues
    5
  • cDNA Data
    22
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 20055 NCBI Gene Model | MGI Sequence Detail 2010 C57BL/6J ±  kb
transcript NM_013647 RefSeq | MGI Sequence Detail 633 C57BL/6  
polypeptide P14131 UniProt | EBI | MGI Sequence Detail 146 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000014258 eukaryotic-type small ribosomal subunit protein uS9
    (term hierarchy)
  • PDB
    7CPU, 7CPV, 7LS1, 7LS2, 7NWI
  • InterPro Domains
    IPR020568 Ribosomal protein uS5 domain 2-type superfamily
    IPR014721 Small ribosomal subunit protein uS5 domain 2-type fold, subgroup
    IPR000754 Small ribosomal subunit protein uS9
    IPR020574 Small ribosomal subunit protein uS9, conserved site
  • GlyGen
    P14131 1 site, 1 O-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 28
    Genomic 5
    cDNA 22
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGD-MRK-14144, MGI:1353634, MGI:2144012
References
more
  • Summaries
    All 45
    Developmental Gene Expression 2
    Gene Ontology 10
    Phenotypes 6
  • Earliest
    J:31514 Meyuhas O, et al., Construction and identification of cDNA clones for mouse ribosomal proteins: application for the study of r-protein gene expression. Gene. 1980 Jul;10(2):113-29
  • Latest
    J:333015 Li H, et al., A male germ-cell-specific ribosome controls male fertility. Nature. 2022 Dec;612(7941):725-731
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory