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Tpbpa Gene Detail
Summary
  • Symbol
    Tpbpa
  • Name
    trophoblast specific protein alpha
  • Synonyms
    4311, clone 4311, Tb-1, Tb1, Tpbp
  • Feature Type
    protein coding gene
  • IDs
    MGI:98795
    NCBI Gene: 21984
  • Alliance
    gene page
  • Transcription Start Sites
    10 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:61086306-61089750 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 32.57 cM
  • Mapping Data
    8 experiments
Strain
Comparison
more
  • SNPs within 2kb
    217 from dbSNP Build 142
  • Strain Annotations
    18
  • PCR
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_98795
 protein coding gene Chr13:61086306-61089798 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020655
 protein coding gene Chr13:60719697-60722937 (-)
A/J MGP_AJ_G0020610
 protein coding gene Chr13:58432037-58435281 (-)
AKR/J MGP_AKRJ_G0020585
 protein coding gene Chr13:60164974-60170356 (-)
BALB/cJ MGP_BALBcJ_G0020606
 protein coding gene Chr13:58695524-58698767 (-)
C3H/HeJ MGP_C3HHeJ_G0020403
 protein coding gene Chr13:59970133-59973848 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021040
 protein coding gene Chr13:62525642-62528885 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018622
 protein coding gene Chr13:56289030-56292643 (-)
CAST/EiJ MGP_CASTEiJ_G0019919
 protein coding gene Chr13:60199660-60204178 (-)
CBA/J MGP_CBAJ_G0020363
 protein coding gene Chr13:64873163-64876406 (-)
DBA/2J MGP_DBA2J_G0020487
 protein coding gene Chr13:57970040-57974280 (-)
FVB/NJ MGP_FVBNJ_G0020465
 protein coding gene Chr13:57469968-57473249 (-)
LP/J MGP_LPJ_G0020563
 protein coding gene Chr13:60969243-60972485 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020495
 protein coding gene Chr13:64141788-64145031 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021083
 protein coding gene Chr13:59782888-59787297 (-)
PWK/PhJ MGP_PWKPhJ_G0019672
 protein coding gene Chr13:58017920-58021529 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019501
 protein coding gene Chr13:58702363-58705418 (-)
WSB/EiJ MGP_WSBEiJ_G0019980
 protein coding gene Chr13:60244718-60249413 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    1031
  • Tissues
    71
  • cDNA Data
    221
  • Literature Summary
    201
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 21984 NCBI Gene Model | MGI Sequence Detail 3445 C57BL/6J ±  kb
transcript NM_009411 RefSeq | MGI Sequence Detail 1573 ZRU/MplStud  
polypeptide P13438 UniProt | EBI | MGI Sequence Detail 124 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 254
    cDNA 222
    Primer pair 11
    Other 21

    Microarray probesets 5
Other
Accession IDs
less
MGD-MRK-14724, MGD-MRK-14725, MGD-MRK-15177, MGI:2145390
References
more
  • Summaries
    All 233
    Developmental Gene Expression 201
    Gene Ontology 2
    Phenotypes 3
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:346630 Zhang X, et al., Maternal RNA transcription in Dlk1-Dio3 domain is critical for proper development of the mouse placental vasculature. Commun Biol. 2024 Mar 23;7(1):363
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory