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Zfp9 Gene Detail
Summary
  • Symbol
    Zfp9
  • Name
    zinc finger protein 9
  • Synonyms
    1810048F22Rik, Krox-4, Zfp-9
  • Feature Type
    protein coding gene
  • IDs
    MGI:99210
    NCBI Gene: 22750
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:118438911-118456281 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 55.86 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    627 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_99210
 protein coding gene Chr6:118438911-118456922 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031187
 protein coding gene Chr6:121213900-121232414 (-)
A/J MGP_AJ_G0031156
 protein coding gene Chr6:116575573-116594129 (-)
AKR/J MGP_AKRJ_G0031087
 protein coding gene Chr6:119706374-119723616 (-)
BALB/cJ MGP_BALBcJ_G0031167
 protein coding gene Chr6:116352401-116371728 (-)
C3H/HeJ MGP_C3HHeJ_G0030542
 protein coding gene Chr6:64569275-64587084 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031625
 protein coding gene Chr6:124330959-124357904 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0030274
 protein coding gene Chr6:120108551-120128611 (-)
CBA/J MGP_CBAJ_G0030850
 protein coding gene Chr6:129250338-129269169 (-)
DBA/2J MGP_DBA2J_G0031006
 protein coding gene Chr6:115473028-115490539 (-)
FVB/NJ MGP_FVBNJ_G0030958
 protein coding gene Chr6:114604887-114623110 (-)
LP/J MGP_LPJ_G0031085
 protein coding gene Chr6:121244882-121262154 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030992
 protein coding gene Chr6:133325709-133343937 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031654
 protein coding gene Chr6:119735884-119753357 (-)
PWK/PhJ MGP_PWKPhJ_G0029989
 protein coding gene Chr6:114491510-114509155 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029818
 protein coding gene Chr6:118446596-118473789 (-)
WSB/EiJ MGP_WSBEiJ_G0030357
 protein coding gene Chr6:120007089-120024876 (-)



Homology
more
  • Human Ortholog
    ZNF25, zinc finger protein 25
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZNF25, zinc finger protein 25
  • Synonyms
    KOX19, Zfp9
  • Links
    NCBI Gene ID: 219749
    neXtProt AC: NX_P17030
    UniProt: P17030

  • Chr Location
    10p11.21
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    752
  • Tissues
    43
  • cDNA Data
    25
  • Literature Summary
    9
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000072623 Ensembl Gene Model | MGI Sequence Detail 17371 C57BL/6J ±  kb
transcript ENSMUST00000161170 Ensembl | MGI Sequence Detail 3968 Not Applicable  
polypeptide ENSMUSP00000123810 Ensembl | MGI Sequence Detail 454 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 32
    Genomic 3
    cDNA 26
    Primer pair 3

    Microarray probesets 3
Other
Accession IDs
less
MGD-MRK-11623, MGD-MRK-15905, MGD-MRK-15962, MGI:1923956, MGI:2141553
References
more
  • Summaries
    All 34
    Developmental Gene Expression 9
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:9172 Chavrier P, et al., Characterization of a mouse multigene family that encodes zinc finger structures. Mol Cell Biol. 1988 Mar;8(3):1319-26
  • Latest
    J:252754 Woods L, et al., Decidualisation and placentation defects are a major cause of age-related reproductive decline. Nat Commun. 2017 Sep 05;8(1):352
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory