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Syt3 Gene Detail
Summary
  • Symbol
    Syt3
  • Name
    synaptotagmin III
  • Feature Type
    protein coding gene
  • IDs
    MGI:99665
    NCBI Gene: 20981
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:44033526-44049611 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 28.83 cM
  • Mapping Data
    9 experiments
Strain
Comparison
more
  • SNPs within 2kb
    445 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
    3
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_99665
 protein coding gene Chr7:44032197-44049611 (+)
129S1/SvImJ MGP_129S1SvImJ_G0032160
 protein coding gene Chr7:44550890-44566776 (+)
A/J MGP_AJ_G0032139
 protein coding gene Chr7:43736136-43751969 (+)
AKR/J MGP_AKRJ_G0032075
 protein coding gene Chr7:44935653-44951917 (+)
BALB/cJ MGP_BALBcJ_G0032151
 protein coding gene Chr7:43734424-43750767 (+)
C3H/HeJ MGP_C3HHeJ_G0031867
 protein coding gene Chr7:45426880-45444405 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032643
 protein coding gene Chr7:46797647-46813497 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029657
 protein coding gene Chr7:46326724-46343050 (+)
CAST/EiJ MGP_CASTEiJ_G0031195
 protein coding gene Chr7:36792680-36811471 (+)
CBA/J MGP_CBAJ_G0031831
 protein coding gene Chr7:48313650-48329571 (+)
DBA/2J MGP_DBA2J_G0031989
 protein coding gene Chr7:43412123-43428130 (+)
FVB/NJ MGP_FVBNJ_G0031940
 protein coding gene Chr7:43141479-43158884 (+)
LP/J MGP_LPJ_G0032067
 protein coding gene Chr7:45225662-45242342 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031977
 protein coding gene Chr7:47077622-47094595 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032659
 protein coding gene Chr7:44154405-44172700 (+)
PWK/PhJ MGP_PWKPhJ_G0030918
 protein coding gene Chr7:36748018-36764449 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030755
 protein coding gene Chr7:32158982-32177645 (+)
WSB/EiJ MGP_WSBEiJ_G0031312
 protein coding gene Chr7:44615305-44632347 (+)



Homology
more
  • Human Ortholog
    SYT3, synaptotagmin 3
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SYT3, synaptotagmin 3
  • Synonyms
    SytIII
  • Links
    NCBI Gene ID: 84258
    neXtProt AC: NX_Q9BQG1
    UniProt: Q9BQG1

  • Chr Location
    19q13.33
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from multigenic genotypes
    11 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    38
  • GO References
    10
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    809
  • Tissues
    94
  • cDNA Data
    11
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000030731 Ensembl Gene Model | MGI Sequence Detail 16086 C57BL/6J ±  kb
transcript ENSMUST00000118962 Ensembl | MGI Sequence Detail 2494 Not Applicable  
polypeptide ENSMUSP00000114070 Ensembl | MGI Sequence Detail 587 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 16
    cDNA 14
    Primer pair 1
    Other 1

    Microarray probesets 3
Other
Accession IDs
less
MGD-MRK-16450, MGI:2141926
References
more
  • Summaries
    All 56
    Developmental Gene Expression 3
    Gene Ontology 10
    Phenotypes 11
  • Earliest
    J:1973 Willison K, The mouse Brachyury gene and mesoderm formation. Trends Genet. 1990 Apr;6(4):104-5
  • Latest
    J:353608 Weingarten DJ, et al., Synaptotagmins 3 and 7 mediate the majority of asynchronous release from synapses in the cerebellum and hippocampus. Cell Rep. 2024 Aug 27;43(8):114595
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory