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U90926 Gene Detail
Summary
  • Symbol
    U90926
  • Name
    cDNA sequence U90926
  • Synonyms
    putative TNF-resistance related protein
Location &
Maps
more
  • Sequence Map
    Chr5:92357754-92363211 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 46.23 cM, cytoband E3
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    249 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1930915
 lncRNA gene Chr5:92357752-92363267 (-)
129S1/SvImJ MGP_129S1SvImJ_G0029744
 protein coding gene Chr5:93377283-93382798 (-)
A/J MGP_AJ_G0029710
 protein coding gene Chr5:89671294-89676807 (-)
AKR/J MGP_AKRJ_G0029656
 protein coding gene Chr5:92606741-92612253 (-)
BALB/cJ MGP_BALBcJ_G0029720
 protein coding gene Chr5:90558050-90563562 (-)
C3H/HeJ MGP_C3HHeJ_G0029443
 protein coding gene Chr5:93009573-93015085 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030174
 protein coding gene Chr5:97084839-97091832 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0027410
 protein coding gene Chr5:85320514-85326322 (-)
CAST/EiJ MGP_CASTEiJ_G0028853
 protein coding gene Chr5:92388185-92393702 (-)
CBA/J MGP_CBAJ_G0029413
 protein coding gene Chr5:100439494-100447427 (-)
DBA/2J MGP_DBA2J_G0029557
 protein coding gene Chr5:89718031-89723545 (-)
FVB/NJ MGP_FVBNJ_G0029516
 protein coding gene Chr5:88567014-88572528 (-)
LP/J MGP_LPJ_G0029645
 protein coding gene Chr5:93745401-93750915 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0029545
 protein coding gene Chr5:105369878-105376027 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030208
 protein coding gene Chr5:92138784-92144297 (-)
PWK/PhJ MGP_PWKPhJ_G0028572
 protein coding gene Chr5:88781149-88786764 (-)
SPRET/EiJ MGP_SPRETEiJ_G0028407
 protein coding gene Chr5:91505074-91511965 (-)
WSB/EiJ MGP_WSBEiJ_G0028932
 protein coding gene Chr5:92596892-92602405 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a null allele exhibit increased susceptibility to endotoxin shock with increased IL6 levels.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    • All Sequences
      28
    • RefSeq
      2
    • UniProt
      1
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 57425 NCBI Gene Model | MGI Sequence Detail 5458 C57BL/6J ±  kb
    transcript NM_001416553 RefSeq | MGI Sequence Detail 466 C57BL/6  
    polypeptide O08546 UniProt | EBI | MGI Sequence Detail 87 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      1 Sequence
    Molecular
    Reagents
    less
    • All nucleic 1
      cDNA 1

      Microarray probesets 2
    References
    more
    • Summaries
      All 19
      Gene Ontology 1
      Phenotypes 9
    • Earliest
      J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
    • Latest
      J:344180 Sabikunnahar B, et al., LncRNA U90926 is dispensable for the development of obesity-associated phenotypes in vivo. Physiol Rep. 2024 Jan;12(1):e15901
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/19/2024
    MGI 6.24     		The Jackson Laboratory