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Igh-VJ558 Complex/Cluster/Region Detail
Summary
  • Symbol
    Igh-VJ558
  • Name
    immunoglobulin heavy chain (J558 family)
  • Synonyms
    MGC:6727
  • Feature Type
    complex/cluster/region
  • IDs
    MGI:96486
Location &
Maps
more
  • Sequence Map
    Genome coordinates not available from the current reference assembly.
  • Genetic Map
    Chromosome 12, Syntenic
  • Mapping Data
    6 experiments
Strain
Comparison
more
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    5
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
    31
Sequences &
Gene Models
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  • All Sequences
    116
  • UniProt
    3
Representative SequencesLengthStrain/SpeciesFlank
genomic J00511 GenBank | ENA | DDBJ | MGI Sequence Detail 1669 BALB/c ±  kb
transcript BC004786 GenBank | ENA | DDBJ | MGI Sequence Detail 1588 CZECHII  
polypeptide P01758 UniProt | EBI | MGI Sequence Detail 117 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    3 Sequences
  • PDB
    1Q0X, 1Q0Y
  • InterPro Domains
    IPR050380 Immune Recognition and Response Modulators
    IPR003597 Immunoglobulin C1-set
    IPR050199 Immunoglobulin Heavy Variable
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR003006 Immunoglobulin/major histocompatibility complex, conserved site
    IPR003599 Immunoglobulin subtype
    IPR013106 Immunoglobulin V-set domain
  • GlyGen
    P01758 1 site, 1 O-linked glycan (1 site)
Molecular
Reagents
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  • All nucleic 283
    Genomic 154
    cDNA 122
    Other 7

    Microarray probesets 10
Other
Accession IDs
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MGD-MRK-11284, MGI:2144876, MGI:2144917
References
more
  • Summaries
    All 77
    Gene Ontology 3
  • Earliest
    J:6380 Sakano H, et al., Two types of somatic recombination are necessary for the generation of complete immunoglobulin heavy-chain genes. Nature. 1980 Aug 14;286(5774):676-83
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory