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Zfp11 Gene Detail
Summary
  • Symbol
    Zfp11
  • Name
    zinc finger protein 11
  • Synonyms
    Krox-6, Zfp-11
  • Feature Type
    protein coding gene
  • IDs
    MGI:99156
    NCBI Gene: 22648
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:129731659-129747152 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 68.22 cM, cytoband F
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    560 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_99156
 protein coding gene Chr5:129731657-129747163 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030127
 protein coding gene Chr5:133763122-133778653 (-)
A/J MGP_AJ_G0030094
 protein coding gene Chr5:128143980-128159492 (-)
AKR/J MGP_AKRJ_G0030028
 protein coding gene Chr5:132311082-132326588 (-)
BALB/cJ MGP_BALBcJ_G0030104
 protein coding gene Chr5:129492846-129508358 (-)
C3H/HeJ MGP_C3HHeJ_G0029821
 protein coding gene Chr5:132863254-132878760 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030557
 protein coding gene Chr5:138889199-138904705 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0027782
 protein coding gene Chr5:122517950-122533868 (-)
CAST/EiJ MGP_CASTEiJ_G0029230
 protein coding gene Chr5:132139355-132156329 (-)
CBA/J MGP_CBAJ_G0029791
 protein coding gene Chr5:144286083-144301589 (-)
DBA/2J MGP_DBA2J_G0029941
 protein coding gene Chr5:128109973-128125479 (-)
FVB/NJ MGP_FVBNJ_G0029897
 protein coding gene Chr5:127204049-127219583 (-)
LP/J MGP_LPJ_G0030030
 protein coding gene Chr5:134271309-134286828 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0029928
 protein coding gene Chr5:147647912-147663431 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030598
 protein coding gene Chr5:131986182-132001709 (-)
PWK/PhJ MGP_PWKPhJ_G0028944
 protein coding gene Chr5:127017095-127033333 (-)
SPRET/EiJ MGP_SPRETEiJ_G0028781
 protein coding gene Chr5:129551932-129567400 (-)
WSB/EiJ MGP_WSBEiJ_G0029304
 protein coding gene Chr5:132673446-132688951 (-)



Homology
more
  • Human Ortholog
    ZNF493, zinc finger protein 493
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZNF493, zinc finger protein 493
  • Links
    NCBI Gene ID: 284443
    neXtProt AC: NX_Q6ZR52
    UniProt: Q6ZR52

  • Chr Location
    19p12; chr19:21397119-21427577 (+)  GRCh38
  • Human Ortholog
    ZNF546, zinc finger protein 546
  • Synonyms
    ZNF49
  • Links
    NCBI Gene ID: 339327
    neXtProt AC: NX_Q86UE3
    UniProt: Q86UE3

  • Chr Location
    19q13.2; chr19:39984134-40021038 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    744
  • Tissues
    29
  • cDNA Data
    14
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 22648 NCBI Gene Model | MGI Sequence Detail 15494 C57BL/6J ±  kb
transcript NM_172462 RefSeq | MGI Sequence Detail 3916 C57BL/6  
polypeptide P10751 UniProt | EBI | MGI Sequence Detail 647 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 19
    Genomic 4
    cDNA 14
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGD-MRK-11625, MGD-MRK-15854, MGD-MRK-15908
References
more
  • Summaries
    All 40
    Developmental Gene Expression 4
    Gene Ontology 3
    Phenotypes 13
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory