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Zfp60 Gene Detail
Summary
  • Symbol
    Zfp60
  • Name
    zinc finger protein 60
  • Synonyms
    6330516O17Rik, Mfg-3, Mfg3
  • Feature Type
    protein coding gene
  • IDs
    MGI:99207
    NCBI Gene: 22718
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:27430834-27451114 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 15.97 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    495 from dbSNP Build 142
  • Strain Annotations
    14
  • PCR
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_99207
 protein coding gene Chr7:27430814-27453127 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031922
 protein coding gene Chr7:26418766-26441046 (+)
A/J MGP_AJ_G0031902
 protein coding gene Chr7:25762708-25788783 (+)
AKR/J MGP_AKRJ_G0031831
 protein coding gene Chr7:26467478-26491318 (+)
BALB/cJ MGP_BALBcJ_G0031906
 protein coding gene Chr7:25986411-26008788 (+)
C3H/HeJ MGP_C3HHeJ_G0031628
 protein coding gene Chr7:26834200-26856606 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032371
 protein coding gene Chr7:27310728-27333209 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029423
 protein coding gene Chr7:26949682-27009130 (+)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0031593
 protein coding gene Chr7:28508904-28537058 (+)
DBA/2J MGP_DBA2J_G0031745
 protein coding gene Chr7:25567834-25592199 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0031825
 protein coding gene Chr7:26713776-26799834 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031736
 protein coding gene Chr7:28046066-28071104 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032402
 protein coding gene Chr7:25986451-26016630 (+)
PWK/PhJ MGP_PWKPhJ_G0030687
 protein coding gene Chr7:20578938-20743504 (+)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    ZNF780A, zinc finger protein 780A
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZNF780A, zinc finger protein 780A
  • Synonyms
    ZNF780
  • Links
    NCBI Gene ID: 284323
    neXtProt AC: NX_O75290
    UniProt: O75290

  • Chr Location
    19q13.2; chr19:40069152-40090943 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    871
  • Tissues
    105
  • cDNA Data
    15
  • Literature Summary
    7
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 22718 NCBI Gene Model | MGI Sequence Detail 20281 C57BL/6J ±  kb
    transcript NM_009560 RefSeq | MGI Sequence Detail 4057 ZRU/MplStud  
    polypeptide P16374 UniProt | EBI | MGI Sequence Detail 707 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 18
      cDNA 16
      Primer pair 2

      Microarray probesets 6
    Other
    Accession IDs
    less
    MGD-MRK-12212, MGD-MRK-12215, MGD-MRK-15959, MGI:1923415, MGI:2141938, MGI:2141962
    References
    more
    • Summaries
      All 44
      Developmental Gene Expression 7
      Gene Ontology 4
      Phenotypes 11
    • Earliest
      J:10152 Passananti C, et al., Mouse genes coding for zinc-finger-containing proteins: characterization and expression in differentiated cells. Proc Natl Acad Sci U S A. 1989 Dec;86(23):9417-21
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    10/29/2024
    MGI 6.24     		The Jackson Laboratory