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Pkm Gene Detail
Summary
  • Symbol
    Pkm
  • Name
    pyruvate kinase, muscle
  • Synonyms
    Pk-2, Pk-3, Pk3, Pkm2
  • Feature Type
    protein coding gene
  • IDs
    MGI:97591
    NCBI Gene: 18746
  • Alliance
    gene page
  • Transcription Start Sites
    16 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:59563859-59586655 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 32.03 cM
  • Mapping Data
    14 experiments
Strain
Comparison
more
  • SNPs within 2kb
    588 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_97591
 protein coding gene Chr9:59563651-59586658 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034904
 protein coding gene Chr9:59017056-59041467 (+)
A/J no annotation
AKR/J MGP_AKRJ_G0034814
 protein coding gene Chr9:58440721-58469720 (+)
BALB/cJ MGP_BALBcJ_G0034877
 protein coding gene Chr9:56857371-56880378 (+)
C3H/HeJ MGP_C3HHeJ_G0034587
 protein coding gene Chr9:58936228-58959091 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035396
 protein coding gene Chr9:60649361-60672356 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032307
 protein coding gene Chr9:56857085-56880199 (+)
CAST/EiJ MGP_CASTEiJ_G0033908
 protein coding gene Chr9:59026509-59049439 (+)
CBA/J MGP_CBAJ_G0034558
 protein coding gene Chr9:62791832-62817638 (+)
DBA/2J MGP_DBA2J_G0034717
 protein coding gene Chr9:56940990-56963722 (+)
FVB/NJ MGP_FVBNJ_G0034659
 protein coding gene Chr9:56201616-56224780 (+)
LP/J MGP_LPJ_G0034800
 protein coding gene Chr9:59320722-59343561 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034702
 protein coding gene Chr9:64225307-64249263 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035418
 protein coding gene Chr9:58452887-58477464 (+)
PWK/PhJ MGP_PWKPhJ_G0033612
 protein coding gene Chr9:57002107-57025915 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0034021
 protein coding gene Chr9:58398341-58426950 (+)



Homology
more
  • Human Ortholog
    PKM, pyruvate kinase M1/2
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PKM, pyruvate kinase M1/2
  • Synonyms
    CTHBP, HEL-S-30, OIP3, p58, PK3, PKM2, TCB, THBP1
  • Links
    NCBI Gene ID: 5315
    neXtProt AC: NX_P14618
    UniProt: P14618

  • Chr Location
    15q23; chr15:72199029-72231819 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    13 phenotypes from 3 alleles in 4 genetic backgrounds
    4 phenotypes from multigenic genotypes
    1 images
    71 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit decreased embryo size, absent egg cylinder, failure of primitive streak formation, absent primitive node and head folds, failure to gastrulate, and complete embryonic lethality by E9.5. Mice homozygous for a spontaneous allele exhibit prenatal lethality around the time of implantation.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    64
  • GO References
    24
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    950
  • Tissues
    122
  • cDNA Data
    33
  • Literature Summary
    30
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 18746 NCBI Gene Model | MGI Sequence Detail 22797 C57BL/6J ±  kb
    transcript NM_001378871 RefSeq | MGI Sequence Detail 3587 ZRU/MplStud  
    polypeptide P52480 UniProt | EBI | MGI Sequence Detail 531 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 44
      cDNA 34
      Primer pair 10

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGD-MRK-13319, MGD-MRK-13320, MGD-MRK-13322, MGI:2143183, MGI:2143184, MGI:2144733
    References
    more
    • Summaries
      All 186
      Developmental Gene Expression 30
      Gene Ontology 24
      Phenotypes 71
    • Earliest
      J:5994 Lalley PA, et al., Conservation of autosomal gene synteny groups in mouse and man. Nature. 1978 Jul 13;274(5667):160-3
    • Latest
      J:358254 Qian GQ, et al., Pyruvate kinase M in germ cells is essential for sperm motility and male fertility but not spermatogenesis. Asian J Androl. 2024 Mar 1;26(2):212-219
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/19/2024
    MGI 6.24     		The Jackson Laboratory