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Plscr4 Gene Detail
Summary
  • Symbol
    Plscr4
  • Name
    phospholipid scramblase 4
  • Feature Type
    protein coding gene
  • IDs
    MGI:2143267
    NCBI Gene: 235527
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:92339431-92374509 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 48.39 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1376 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2143267
 protein coding gene Chr9:92339426-92374509 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035129
 protein coding gene Chr9:93508162-93547308 (+)
A/J MGP_AJ_G0035110
 protein coding gene Chr9:90272983-90309583 (+)
AKR/J MGP_AKRJ_G0035042
 protein coding gene Chr9:92380440-92416285 (+)
BALB/cJ MGP_BALBcJ_G0035103
 protein coding gene Chr9:89917285-89952458 (+)
C3H/HeJ MGP_C3HHeJ_G0034813
 protein coding gene Chr9:92845950-92881615 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035623
 protein coding gene Chr9:96131413-96168181 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0034125
 protein coding gene Chr9:92587119-92624068 (+)
CBA/J MGP_CBAJ_G0034781
 protein coding gene Chr9:99450770-99485850 (+)
DBA/2J MGP_DBA2J_G0034943
 protein coding gene Chr9:89784018-89818996 (+)
FVB/NJ MGP_FVBNJ_G0034891
 protein coding gene Chr9:88743367-88780853 (+)
LP/J MGP_LPJ_G0035022
 protein coding gene Chr9:93703782-93744190 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034930
 protein coding gene Chr9:101423189-101460362 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035643
 protein coding gene Chr9:92636940-92671980 (+)
PWK/PhJ MGP_PWKPhJ_G0033832
 protein coding gene Chr9:89944124-89979758 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033667
 protein coding gene Chr9:92701072-92743551 (+)
WSB/EiJ MGP_WSBEiJ_G0034245
 protein coding gene Chr9:92523843-92560688 (+)



Homology
more
  • Human Ortholog
    PLSCR4, phospholipid scramblase 4
  • Vertebrate Orthologs
    5
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PLSCR4, phospholipid scramblase 4
  • Synonyms
    TRA1
  • Links
    NCBI Gene ID: 57088
    neXtProt AC: NX_Q9NRQ2
    UniProt: Q9NRQ2

  • Chr Location
    3q24; chr3:146192335-146251179 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    711
  • Tissues
    1
  • cDNA Data
    23
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 235527 NCBI Gene Model | MGI Sequence Detail 35079 C57BL/6J ±  kb
transcript NM_178711 RefSeq | MGI Sequence Detail 3199 C57BL/6  
polypeptide P58196 UniProt | EBI | MGI Sequence Detail 326 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 23
    cDNA 23

    Microarray probesets 4
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 3
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory