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Zfp39 Gene Detail
Summary
  • Symbol
    Zfp39
  • Name
    zinc finger protein 39
  • Synonyms
    CTfin33, Zfp-39
  • Feature Type
    protein coding gene
  • IDs
    MGI:99183
    NCBI Gene: 22698
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:58778979-58795051 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 36.35 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    599 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_99183
 protein coding gene Chr11:58778979-58795051 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018380
 protein coding gene Chr11:58666905-58683280 (-)
A/J MGP_AJ_G0018349
 protein coding gene Chr11:56413513-56438974 (-)
AKR/J MGP_AKRJ_G0018319
 protein coding gene Chr11:58325226-58342597 (-)
BALB/cJ MGP_BALBcJ_G0018320
 protein coding gene Chr11:56795554-56811613 (-)
C3H/HeJ MGP_C3HHeJ_G0018133
 protein coding gene Chr11:58201510-58218536 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018772
 protein coding gene Chr11:60525910-60557983 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016417
 protein coding gene Chr11:53704207-53721235 (-)
CAST/EiJ MGP_CASTEiJ_G0017691
 protein coding gene Chr11:58329328-58347353 (-)
CBA/J MGP_CBAJ_G0018104
 protein coding gene Chr11:63181816-63199576 (-)
DBA/2J MGP_DBA2J_G0018216
 protein coding gene Chr11:56107018-56123096 (-)
FVB/NJ MGP_FVBNJ_G0018207
 protein coding gene Chr11:55753577-55770350 (-)
LP/J MGP_LPJ_G0018289
 protein coding gene Chr11:59262207-59281326 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018231
 protein coding gene Chr11:64337331-64354465 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018813
 protein coding gene Chr11:58335669-58351539 (-)
PWK/PhJ MGP_PWKPhJ_G0017461
 protein coding gene Chr11:56691074-56707600 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017254
 protein coding gene Chr11:58132437-58156559 (-)
WSB/EiJ MGP_WSBEiJ_G0017741
 protein coding gene Chr11:58016011-58032303 (-)



Homology
more
  • Human Ortholog
    ZNF717, zinc finger protein 717
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZNF717, zinc finger protein 717
  • Synonyms
    OB1, X17, ZNF838
  • Links
    NCBI Gene ID: 100131827
    neXtProt AC: NX_Q9BY31
    UniProt: Q9BY31

  • Chr Location
    3p12.3
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    736
  • Tissues
    30
  • cDNA Data
    18
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 22698 NCBI Gene Model | MGI Sequence Detail 16073 C57BL/6J ±  kb
transcript NM_011758 RefSeq | MGI Sequence Detail 3890 C57BL/6  
polypeptide Q02525 UniProt | EBI | MGI Sequence Detail 718 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 18
    cDNA 18

    Microarray probesets 3
Other
Accession IDs
less
MGD-MRK-15880, MGD-MRK-15935
References
more
  • Summaries
    All 34
    Developmental Gene Expression 4
    Gene Ontology 4
    Phenotypes 8
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory