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Glt6d1 Gene Detail
Summary
  • Symbol
    Glt6d1
  • Name
    glycosyltransferase 6 domain containing 1
  • Synonyms
    4933411C14Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918353
    NCBI Gene: 71103
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:25683871-25705860 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 18.07 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    431 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918353
 protein coding gene Chr2:25673474-25705908 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025471
 protein coding gene Chr2:23718644-23740439 (-)
A/J MGP_AJ_G0025448
 protein coding gene Chr2:22808981-22824783 (-)
AKR/J MGP_AKRJ_G0025418
 protein coding gene Chr2:23556472-23571593 (-)
BALB/cJ MGP_BALBcJ_G0025444
 protein coding gene Chr2:22912066-22933567 (-)
C3H/HeJ MGP_C3HHeJ_G0025205
 protein coding gene Chr2:23482189-23502203 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025888
 protein coding gene Chr2:24476610-24493723 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023299
 protein coding gene Chr2:21694289-21707245 (-)
CAST/EiJ MGP_CASTEiJ_G0024668
 protein coding gene Chr2:23368307-23386114 (-)
CBA/J MGP_CBAJ_G0025183
 protein coding gene Chr2:25316013-25331544 (-)
DBA/2J MGP_DBA2J_G0025316
 protein coding gene Chr2:22633366-22655489 (-)
FVB/NJ MGP_FVBNJ_G0025278
 protein coding gene Chr2:22377954-22392233 (-)
LP/J MGP_LPJ_G0025402
 protein coding gene Chr2:23650856-23671997 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025309
 protein coding gene Chr2:25488690-25507650 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025947
 protein coding gene Chr2:23511477-23533294 (-)
PWK/PhJ MGP_PWKPhJ_G0024416
 protein coding gene Chr2:22429578-22446642 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024216
 protein coding gene Chr2:23638330-23651474 (-)
WSB/EiJ MGP_WSBEiJ_G0024737
 protein coding gene Chr2:23576709-23596107 (-)



Homology
more
  • Human Ortholog
    GLT6D1, glycosyltransferase 6 domain containing 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    GLT6D1, glycosyltransferase 6 domain containing 1
  • Synonyms
    GLTDC1, GT6M7
  • Links
    NCBI Gene ID: 360203
    neXtProt AC: NX_Q7Z4J2
    UniProt: Q7Z4J2

  • Chr Location
    9q34.3; chr9:135623648-135641216 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    1 phenotype from multigenic genotypes
    3 phenotype references
Male mice exhibit normal fertility.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000036401 Ensembl Gene Model | MGI Sequence Detail 21990 C57BL/6J ±  kb
    transcript ENSMUST00000038010 Ensembl | MGI Sequence Detail 1211 Not Applicable  
    polypeptide ENSMUSP00000048642 Ensembl | MGI Sequence Detail 311 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 5
      cDNA 5

      Microarray probesets 2
    References
    more
    • Summaries
      All 21
      Gene Ontology 3
      Phenotypes 3
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:296968 Park S, et al., CRISPR/Cas9-mediated genome-edited mice reveal 10 testis-enriched genes are dispensable for male fecundity. Biol Reprod. 2020 Aug 4;103(2):195-204
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/19/2024
    MGI 6.24     		The Jackson Laboratory