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Bmal2 Gene Detail
Summary
  • Symbol
    Bmal2
  • Name
    basic helix-loop-helix ARNT like 2
  • Synonyms
    4632430A05Rik, Arntl2, bHLHe6, MOP9
  • Feature Type
    protein coding gene
  • IDs
    MGI:2684845
    NCBI Gene: 272322
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:146697553-146735027 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 77.70 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    591 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2684845
 protein coding gene Chr6:146696230-146735027 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031491
 protein coding gene Chr6:151823479-151861976 (+)
A/J MGP_AJ_G0031466
 protein coding gene Chr6:145805174-145842664 (+)
AKR/J MGP_AKRJ_G0031394
 protein coding gene Chr6:150138638-150181433 (+)
BALB/cJ MGP_BALBcJ_G0031474
 protein coding gene Chr6:145557290-145594698 (+)
C3H/HeJ MGP_C3HHeJ_G0031195
 protein coding gene Chr6:150192426-150229975 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031935
 protein coding gene Chr6:155871681-155908452 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029059
 protein coding gene Chr6:144544303-144581031 (+)
CAST/EiJ MGP_CASTEiJ_G0030564
 protein coding gene Chr6:149829602-149866361 (+)
CBA/J MGP_CBAJ_G0031155
 protein coding gene Chr6:161820309-161863976 (+)
DBA/2J MGP_DBA2J_G0031311
 protein coding gene Chr6:144583981-144621094 (+)
FVB/NJ MGP_FVBNJ_G0031263
 protein coding gene Chr6:143326139-143362809 (+)
LP/J MGP_LPJ_G0031397
 protein coding gene Chr6:151904061-151945294 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031303
 protein coding gene Chr6:165545921-165586539 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031968
 protein coding gene Chr6:149964305-150001514 (+)
PWK/PhJ MGP_PWKPhJ_G0030290
 protein coding gene Chr6:143105105-143143914 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030114
 protein coding gene Chr6:148082022-148150292 (+)
WSB/EiJ MGP_WSBEiJ_G0030657
 protein coding gene Chr6:150580862-150618425 (+)



Homology
more
  • Human Ortholog
    BMAL2, basic helix-loop-helix ARNT like 2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    BMAL2, basic helix-loop-helix ARNT like 2
  • Synonyms
    ARNTL2, bHLHe6, CLIF, MOP9, PASD9
  • Links
    NCBI Gene ID: 56938
    neXtProt AC: NX_Q8WYA1
    UniProt: Q8WYA1

  • Chr Location
    12p11.23; chr12:27332836-27425289 (+)  GRCh38
Human Diseases
more
  • Diseases
    3 with human BMAL2 associations

Human Disease Mouse Models
      
IDs
IDs
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    34
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    838
  • Tissues
    127
  • cDNA Data
    6
  • Literature Summary
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000040187 Ensembl Gene Model | MGI Sequence Detail 37475 C57BL/6J ±  kb
transcript ENSMUST00000111639 Ensembl | MGI Sequence Detail 2923 Not Applicable  
polypeptide ENSMUSP00000107266 Ensembl | MGI Sequence Detail 579 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 7
    Primer pair 2

    Microarray probesets 3
Other
Accession IDs
less
MGI:1924837, MGI:7413982
References
more
  • Summaries
    All 46
    Developmental Gene Expression 7
    Gene Ontology 8
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:351194 Zhou M, et al., BMAL2 promotes eCIRP-induced macrophage endotoxin tolerance. Front Immunol. 2024;15:1426682
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/22/2024
MGI 6.24 		The Jackson Laboratory