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Fam98a Gene Detail
Summary
  • Symbol
    Fam98a
  • Name
    family with sequence similarity 98, member A
  • Synonyms
    2810405J04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919972
    NCBI Gene: 72722
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:75844081-75858941 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 46.62 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    445 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919972
 protein coding gene Chr17:75844080-75858941 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024035
 protein coding gene Chr17:78250870-78266037 (-)
A/J MGP_AJ_G0023992
 protein coding gene Chr17:75812889-75826368 (-)
AKR/J MGP_AKRJ_G0023961
 protein coding gene Chr17:76931071-76945715 (-)
BALB/cJ MGP_BALBcJ_G0023994
 protein coding gene Chr17:75715083-75729932 (-)
C3H/HeJ MGP_C3HHeJ_G0023758
 protein coding gene Chr17:77843298-77857935 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024439
 protein coding gene Chr17:81050435-81065291 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021883
 protein coding gene Chr17:71415465-71430255 (-)
CAST/EiJ MGP_CASTEiJ_G0023238
 protein coding gene Chr17:78380772-78396951 (-)
CBA/J MGP_CBAJ_G0023732
 protein coding gene Chr17:84433240-84447892 (-)
DBA/2J MGP_DBA2J_G0023861
 protein coding gene Chr17:74379402-74394068 (-)
FVB/NJ MGP_FVBNJ_G0023827
 protein coding gene Chr17:73921398-73936242 (-)
LP/J MGP_LPJ_G0023944
 protein coding gene Chr17:79014657-79029376 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023855
 protein coding gene Chr17:84214123-84228982 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024483
 protein coding gene Chr17:77406673-77421485 (-)
PWK/PhJ MGP_PWKPhJ_G0022984
 protein coding gene Chr17:73801971-73816898 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022795
 protein coding gene Chr17:74150856-74165614 (-)
WSB/EiJ MGP_WSBEiJ_G0023305
 protein coding gene Chr17:78278765-78293430 (-)



Homology
more
  • Human Ortholog
    FAM98A, family with sequence similarity 98 member A
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    FAM98A, family with sequence similarity 98 member A
  • Links
    NCBI Gene ID: 25940
    neXtProt AC: NX_Q8NCA5
    UniProt: Q8NCA5

  • Chr Location
    2p22.3; chr2:33532744-33599347 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    709
  • Tissues
    3
  • cDNA Data
    82
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000002017 Ensembl Gene Model | MGI Sequence Detail 14861 C57BL/6J ±  kb
transcript ENSMUST00000112507 Ensembl | MGI Sequence Detail 2817 Not Applicable  
polypeptide ENSMUSP00000108126 Ensembl | MGI Sequence Detail 515 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 83
    Genomic 1
    cDNA 82

    Microarray probesets 3
Other
Accession IDs
less
MGI:2146962
References
more
  • Summaries
    All 31
    Developmental Gene Expression 2
    Gene Ontology 4
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:313619 Bedogni F, et al., Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Front Mol Neurosci. 2021;14:686034
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory