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Slc22a23 Gene Detail
Summary
  • Symbol
    Slc22a23
  • Name
    solute carrier family 22, member 23
  • Synonyms
    3110004L20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920352
    NCBI Gene: 73102
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:34363141-34529165 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 14.05 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    4573 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920352
 protein coding gene Chr13:34363141-34530666 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020450
 protein coding gene Chr13:32285222-32455434 (-)
A/J MGP_AJ_G0020404
 protein coding gene Chr13:31339090-31504254 (-)
AKR/J MGP_AKRJ_G0020382
 protein coding gene Chr13:32078656-32243727 (-)
BALB/cJ MGP_BALBcJ_G0020400
 protein coding gene Chr13:31406374-31571854 (-)
C3H/HeJ MGP_C3HHeJ_G0020199
 protein coding gene Chr13:32022816-32189316 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020833
 protein coding gene Chr13:33361099-33530559 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018420
 protein coding gene Chr13:29645837-29816784 (-)
CAST/EiJ MGP_CASTEiJ_G0019714
 protein coding gene Chr13:31666898-31836704 (-)
CBA/J MGP_CBAJ_G0020160
 protein coding gene Chr13:34807080-34976272 (-)
DBA/2J MGP_DBA2J_G0020282
 protein coding gene Chr13:30868523-31032597 (-)
FVB/NJ MGP_FVBNJ_G0020261
 protein coding gene Chr13:30440799-30606259 (-)
LP/J MGP_LPJ_G0020357
 protein coding gene Chr13:32521592-32688194 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020291
 protein coding gene Chr13:35025423-35196019 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020876
 protein coding gene Chr13:31741079-31910117 (-)
PWK/PhJ MGP_PWKPhJ_G0019469
 protein coding gene Chr13:30982088-31150343 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019296
 protein coding gene Chr13:30384993-30552599 (-)
WSB/EiJ MGP_WSBEiJ_G0019776
 protein coding gene Chr13:32093053-32260436 (-)



Homology
more
  • Human Ortholog
    SLC22A23, solute carrier family 22 member 23
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SLC22A23, solute carrier family 22 member 23
  • Synonyms
    C6orf85
  • Links
    NCBI Gene ID: 63027
    neXtProt AC: NX_A1A5C7
    UniProt: A1A5C7

  • Chr Location
    6p25.2; chr6:3268962-3457050 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    712
  • Tissues
    6
  • cDNA Data
    94
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000038267 Ensembl Gene Model | MGI Sequence Detail 166025 C57BL/6J ±  kb
transcript ENSMUST00000040336 Ensembl | MGI Sequence Detail 6251 Not Applicable  
polypeptide ENSMUSP00000042742 Ensembl | MGI Sequence Detail 689 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 95
    cDNA 94
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 36
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 12
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:141688 Goldsworthy M, et al., Role of the transcription factor sox4 in insulin secretion and impaired glucose tolerance. Diabetes. 2008 Aug;57(8):2234-44
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory