Slc2a13 MGI Mouse Gene Detail - MGI:2146030 - solute carrier family 2 (facilitated glucose transporter), member 13

Symbol

Slc2a13
Name

solute carrier family 2 (facilitated glucose transporter), member 13
Synonyms

A630029G22Rik

Feature Type

protein coding gene
IDs

MGI:2146030
NCBI Gene: 239606
Alliance

gene page
Transcription Start Sites

2 TSS

Sequence Map

Chr15:91151899-91457464 bp, - strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 15, 46.05 cM
Mapping Data

2 experiments

SNPs within 2kb

12234 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2146030	protein coding gene	Chr15:91151894-91457467 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0022248	protein coding gene	Chr15:92556929-92881982 (-)
A/J	MGP_AJ_G0022207	protein coding gene	Chr15:88978949-89290669 (-)
AKR/J	MGP_AKRJ_G0022182	protein coding gene	Chr15:91622813-91945180 (-)
BALB/cJ	MGP_BALBcJ_G0022213	protein coding gene	Chr15:89101012-89418912 (-)
C3H/HeJ	MGP_C3HHeJ_G0021983	protein coding gene	Chr15:91628672-91945300 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0022658	protein coding gene	Chr15:95943024-96270221 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0020184	protein coding gene	Chr15:85125749-85431700 (-)
CAST/EiJ	MGP_CASTEiJ_G0021505	protein coding gene	Chr15:92440013-92773538 (-)
CBA/J	MGP_CBAJ_G0021950	protein coding gene	Chr15:99154226-99494896 (-)
DBA/2J	MGP_DBA2J_G0022077	protein coding gene	Chr15:88428045-88734195 (-)
FVB/NJ	MGP_FVBNJ_G0022056	protein coding gene	Chr15:87470220-87777426 (-)
LP/J	MGP_LPJ_G0022148	protein coding gene	Chr15:92693193-93013365 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0022076	protein coding gene	Chr15:103543219-103883310 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0022673	protein coding gene	Chr15:91736868-92049445 (-)
PWK/PhJ	MGP_PWKPhJ_G0021246	protein coding gene	Chr15:88474155-88791833 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0021080	protein coding gene	Chr15:91448813-91779024 (-)
WSB/EiJ	MGP_WSBEiJ_G0021554	protein coding gene	Chr15:92190468-92509609 (-)

Human Ortholog

SLC2A13, solute carrier family 2 member 13

Vertebrate Orthologs

3

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

SLC2A13, solute carrier family 2 member 13
Synonyms

HMIT
Links

HGNC:15956

NCBI Gene ID: 114134

neXtProt AC: NX_Q96QE2

UniProt: Q96QE2
Chr Location

12q12; chr12:39755025-40106089 (-) GRCh38

MGI Vertebrate Homology

Slc2a13 stringent orthology
1 human;1 mouse;1 rat;1 zebrafish
HCOP

vertebrate homology predictions: SLC2A13
Gene Tree

Slc2a13

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References

1 with disease annotations

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Phenotype Summary

2 phenotypes from 1 allele in 1 genetic background
29 phenotype references

Phenotype Overview

Blue squares indicate phenotypes directly attributed to mutations/alleles of this gene.

adipose tissue	behavior/neurological	cardiovascular system	cellular	craniofacial	digestive/alimentary system	embryo	endocrine/exocrine glands	growth/size/body	hearing/vestibular/ear	hematopoietic system	homeostasis/metabolism	integument	immune system	limbs/digits/tail	liver/biliary system	mortality/aging	muscle	nervous system	pigmentation	renal/urinary system	reproductive system	respiratory system	skeleton	taste/olfaction	neoplasm	vision/eye

Click cells to view annotations.

All Mutations and Alleles

9
Chemically induced (other)

1
Endonuclease-mediated

2
Gene trapped

1
Radiation induced

2
Targeted

3
Genomic Mutations

3 involving Slc2a13
Incidental Mutations

Mutagenetix , APF , CvDC
Find Mice (IMSR)

29 strains or lines available

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All GO Annotations

39
GO References

8

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

768
Tissues

13
cDNA Data

30
Literature Summary

2

Images

Tissue x Stage Matrix

Other Mouse Links

Allen Institute

GEO

Expression Atlas
Other Vertebrate Links

Xenbase slc2a13

ZFIN slc2a13b

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All Sequences

48
RefSeq

3
UniProt

5
CCDS

CCDS27761.2

Ensembl

ENSMUSG00000036298 (Evidence)
NCBI Gene

239606

			Length	Strain/Species	Flank
genomic	ENSMUSG00000036298	Ensembl Gene Model \| MGI Sequence Detail	305566	C57BL/6J	± kb
transcript	ENSMUST00000109283	Ensembl \| MGI Sequence Detail	6536	Not Applicable
polypeptide	ENSMUSP00000104906	Ensembl \| MGI Sequence Detail	637	Not Applicable

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UniProt

5 Sequences
Protein Ontology

PR:000015062 proton myo-inositol cotransporter

(term hierarchy)
InterPro Domains

IPR005828 Major facilitator, sugar transporter-like

IPR020846 Major facilitator superfamily domain

IPR036259 MFS transporter superfamily

IPR050814 Myo-inositol Transporter

IPR003663 Sugar/inositol transporter

IPR005829 Sugar transporter, conserved site
GlyGen

Q3UHK1 4 sites, 1 N-linked glycan (2 sites)

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All nucleic 31

cDNA 30

Primer pair 1

Microarray probesets 5

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MGI:2685154

Summaries

All 58

Developmental Gene Expression 2

Diseases 1

Gene Ontology 8

Phenotypes 29
Earliest

J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
Latest

J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136

TSS for Slc2a13:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr135956	Chr15:91457384-91457448 (-)	48 bp
Tssr135955	Chr15:91432907-91432915 (-)	24,553 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 11/05/2024 MGI 6.24