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4833420G17Rik Gene Detail
Summary
  • Symbol
    4833420G17Rik
  • Name
    RIKEN cDNA 4833420G17 gene
  • Synonyms
    2210017J06Rik, 5730533D17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914642
    NCBI Gene: 67392
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:119599304-119622656 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 67.24 cM, cytoband D2.3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    903 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914642
 protein coding gene Chr13:119599295-119622656 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020971
 protein coding gene Chr13:122483561-122510094 (+)
A/J MGP_AJ_G0020921
 protein coding gene Chr13:117521998-117545849 (+)
AKR/J MGP_AKRJ_G0020896
 protein coding gene Chr13:121002239-121025459 (+)
BALB/cJ MGP_BALBcJ_G0020921
 protein coding gene Chr13:118195250-118220598 (+)
C3H/HeJ MGP_C3HHeJ_G0020710
 protein coding gene Chr13:120815441-120840518 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021357
 protein coding gene Chr13:126057227-126085058 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018926
 protein coding gene Chr13:112503529-112527078 (+)
CAST/EiJ MGP_CASTEiJ_G0020229
 protein coding gene Chr13:120680308-120703246 (+)
CBA/J MGP_CBAJ_G0020672
 protein coding gene Chr13:130905796-130928903 (+)
DBA/2J MGP_DBA2J_G0020795
 protein coding gene Chr13:117132950-117156168 (+)
FVB/NJ MGP_FVBNJ_G0020779
 protein coding gene Chr13:115728546-115752427 (+)
LP/J MGP_LPJ_G0020871
 protein coding gene Chr13:122450828-122474973 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020807
 protein coding gene Chr13:131537700-131563885 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0021393
 protein coding gene Chr13:120507696-120532059 (+)
PWK/PhJ MGP_PWKPhJ_G0019982
 protein coding gene Chr13:116018443-116042435 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019805
 protein coding gene Chr13:116882833-116905494 (+)
WSB/EiJ MGP_WSBEiJ_G0020287
 protein coding gene Chr13:121181791-121207771 (+)



Homology
more
  • Human Ortholog
    C5orf34, chromosome 5 open reading frame 34
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C5orf34, chromosome 5 open reading frame 34
  • Links
    NCBI Gene ID: 375444
    neXtProt AC: NX_Q96MH7
    UniProt: Q96MH7

  • Chr Location
    5p12; chr5:43486709-43515148 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    710
  • Tissues
    3
  • cDNA Data
    17
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000062822 Ensembl Gene Model | MGI Sequence Detail 23353 C57BL/6J ±  kb
    transcript ENSMUST00000026519 Ensembl | MGI Sequence Detail 2565 Not Applicable  
    polypeptide ENSMUSP00000026519 Ensembl | MGI Sequence Detail 639 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 18
      cDNA 17
      Primer pair 1

      Microarray probesets 7
    Other
    Accession IDs
    less
    MGI:1913905, MGI:1917366, MGI:2145411, MGI:2145524
    References
    more
    • Summaries
      All 32
      Developmental Gene Expression 2
      Phenotypes 8
    • Earliest
      J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/05/2024
    MGI 6.24     		The Jackson Laboratory