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Tceanc Gene Detail
Summary
  • Symbol
    Tceanc
  • Name
    transcription elongation factor A (SII) N-terminal and central domain containing
  • Synonyms
    A630018P17Rik, LOC245695
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685236
    NCBI Gene: 245695
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:165282808-165301563 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 77.59 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    526 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685236
 protein coding gene ChrX:165282806-165301594 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036267
 protein coding gene ChrX:164629076-164650101 (-)
A/J MGP_AJ_G0036236
 protein coding gene ChrX:163781443-163802574 (-)
AKR/J MGP_AKRJ_G0036166
 protein coding gene ChrX:169040133-169059577 (-)
BALB/cJ MGP_BALBcJ_G0036231
 protein coding gene ChrX:161770797-161789772 (-)
C3H/HeJ MGP_C3HHeJ_G0035938
 protein coding gene ChrX:164944234-164965718 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036754
 protein coding gene ChrX:169427878-169446723 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033574
 protein coding gene ChrX:154643499-154662546 (-)
CAST/EiJ MGP_CASTEiJ_G0035225
 protein coding gene ChrX:143834362-143854969 (-)
CBA/J MGP_CBAJ_G0035912
 protein coding gene ChrX:174371912-174394903 (-)
DBA/2J MGP_DBA2J_G0036078
 protein coding gene ChrX:162611596-162630301 (-)
FVB/NJ MGP_FVBNJ_G0036010
 protein coding gene ChrX:161735905-161754909 (-)
LP/J MGP_LPJ_G0036163
 protein coding gene ChrX:165757302-165776022 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0036042
 protein coding gene ChrX:183084758-183105823 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036793
 protein coding gene ChrX:164116421-164136405 (-)
PWK/PhJ MGP_PWKPhJ_G0034924
 protein coding gene ChrX:140578985-140598531 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034743
 protein coding gene ChrX:144354831-144377427 (-)
WSB/EiJ MGP_WSBEiJ_G0035361
 protein coding gene ChrX:161951270-161970207 (-)



Homology
more
  • Human Ortholog
    TCEANC, transcription elongation factor A N-terminal and central domain containing
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TCEANC, transcription elongation factor A N-terminal and central domain containing
  • Synonyms
    TCEANC1
  • Links
    NCBI Gene ID: 170082
    neXtProt AC: NX_Q8N8B7
    UniProt: Q8N8B7

  • Chr Location
    Xp22.2; chrX:13653112-13681964 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    20
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000051224 Ensembl Gene Model | MGI Sequence Detail 18756 C57BL/6J ±  kb
transcript ENSMUST00000112188 Ensembl | MGI Sequence Detail 4050 Not Applicable  
polypeptide ENSMUSP00000107806 Ensembl | MGI Sequence Detail 359 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000032627 transcription elongation factor A N-terminal and central domain-containing protein
    (term hierarchy)
  • InterPro Domains
    IPR035441 TFIIS/LEDGF domain superfamily
    IPR035100 Transcription elongation factor, IIS-type
    IPR003618 Transcription elongation factor S-II, central domain
    IPR036575 Transcription elongation factor S-II, central domain superfamily
    IPR017923 Transcription factor IIS, N-terminal
Molecular
Reagents
less
  • All nucleic 20
    cDNA 20

    Microarray probesets 2
References
more
  • Summaries
    All 25
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:190524 Shalom-Barak T, et al., Placental PPARgamma regulates spatiotemporally diverse genes and a unique metabolic network. Dev Biol. 2012 Dec 1;372(1):143-55
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory