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Pla2g4c Gene Detail
Summary
  • Symbol
    Pla2g4c
  • Name
    phospholipase A2, group IVC (cytosolic, calcium-independent)
  • Synonyms
    CPLA2-gamma
  • Feature Type
    protein coding gene
  • IDs
    MGI:1196403
    NCBI Gene: 232889
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:13058580-13094597 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 7.84 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    997 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1196403
 protein coding gene Chr7:13045432-13094597 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031672
 protein coding gene Chr7:10721764-10754681 (+)
A/J MGP_AJ_G0031646
 protein coding gene Chr7:10582852-10619095 (+)
AKR/J MGP_AKRJ_G0031569
 protein coding gene Chr7:10827890-10866739 (+)
BALB/cJ MGP_BALBcJ_G0031651
 protein coding gene Chr7:10665003-10714962 (+)
C3H/HeJ MGP_C3HHeJ_G0031372
 protein coding gene Chr7:10972889-11013929 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032115
 protein coding gene Chr7:11302909-11353913 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029206
 protein coding gene Chr7:12424700-12460050 (+)
CAST/EiJ MGP_CASTEiJ_G0030730
 protein coding gene Chr7:8451627-8500917 (+)
CBA/J MGP_CBAJ_G0031330
 protein coding gene Chr7:11509174-11551015 (+)
DBA/2J MGP_DBA2J_G0031488
 protein coding gene Chr7:10441737-10478194 (+)
FVB/NJ MGP_FVBNJ_G0031444
 protein coding gene Chr7:10467668-10501578 (+)
LP/J MGP_LPJ_G0031574
 protein coding gene Chr7:10833604-10875919 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031479
 protein coding gene Chr7:11588464-11651015 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032145
 protein coding gene Chr7:10600786-10654709 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0030284
 protein coding gene Chr7:6672651-6707015 (+)
WSB/EiJ MGP_WSBEiJ_G0030825
 protein coding gene Chr7:10637942-10676097 (+)



Homology
more
  • Human Ortholog
    PLA2G4C, phospholipase A2 group IVC
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PLA2G4C, phospholipase A2 group IVC
  • Synonyms
    CPLA2-gamma
  • Links
    NCBI Gene ID: 8605
    neXtProt AC: NX_Q9UP65
    UniProt: Q9UP65

  • Chr Location
    19q13.33; chr19:48047843-48110817 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    34
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    766
  • Tissues
    51
  • cDNA Data
    50
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000033847 Ensembl Gene Model | MGI Sequence Detail 36018 C57BL/6J ±  kb
transcript ENSMUST00000108528 Ensembl | MGI Sequence Detail 3390 Not Applicable  
polypeptide ENSMUSP00000104168 Ensembl | MGI Sequence Detail 607 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 52
    cDNA 50
    Primer pair 2

    Microarray probesets 2
References
more
  • Summaries
    All 35
    Developmental Gene Expression 2
    Gene Ontology 7
    Phenotypes 4
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory