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Snx31 Gene Detail
Summary
  • Symbol
    Snx31
  • Name
    sorting nexin 31
  • Synonyms
    4631426E05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913946
    NCBI Gene: 66696
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:36504208-36555718 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 14.48 cM, cytoband C
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1989 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913946
 protein coding gene Chr15:36504208-36560274 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021795
 protein coding gene Chr15:34890144-34939441 (-)
A/J MGP_AJ_G0021756
 protein coding gene Chr15:33597111-33648428 (-)
AKR/J MGP_AKRJ_G0021735
 protein coding gene Chr15:34515040-34578376 (-)
BALB/cJ MGP_BALBcJ_G0021763
 protein coding gene Chr15:33601467-33652818 (-)
C3H/HeJ MGP_C3HHeJ_G0021537
 protein coding gene Chr15:34488419-34542708 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022202
 protein coding gene Chr15:36220858-36274595 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019739
 protein coding gene Chr15:31406262-31457675 (-)
CAST/EiJ MGP_CASTEiJ_G0021053
 protein coding gene Chr15:34914147-34966944 (-)
CBA/J MGP_CBAJ_G0021506
 protein coding gene Chr15:37394987-37448984 (-)
DBA/2J MGP_DBA2J_G0021630
 protein coding gene Chr15:33410078-33461662 (-)
FVB/NJ MGP_FVBNJ_G0021608
 protein coding gene Chr15:32810367-32865739 (-)
LP/J MGP_LPJ_G0021699
 protein coding gene Chr15:34799160-34850489 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021632
 protein coding gene Chr15:40496195-40550292 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022225
 protein coding gene Chr15:34669211-34722570 (-)
PWK/PhJ MGP_PWKPhJ_G0020797
 protein coding gene Chr15:33438965-33489067 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020635
 protein coding gene Chr15:34373453-34426182 (-)
WSB/EiJ MGP_WSBEiJ_G0021109
 protein coding gene Chr15:34641988-34697479 (-)



Homology
more
  • Human Ortholog
    SNX31, sorting nexin 31
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SNX31, sorting nexin 31
  • Links
    NCBI Gene ID: 169166
    neXtProt AC: NX_Q8N9S9
    UniProt: Q8N9S9

  • Chr Location
    8q22.3; chr8:100572874-100663585 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    782
  • Tissues
    15
  • cDNA Data
    6
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000013611 Ensembl Gene Model | MGI Sequence Detail 51511 C57BL/6J ±  kb
transcript ENSMUST00000161202 Ensembl | MGI Sequence Detail 2344 Not Applicable  
polypeptide ENSMUSP00000124063 Ensembl | MGI Sequence Detail 439 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    Genomic 1
    cDNA 6
    Primer pair 1

    Microarray probesets 2
References
more
  • Summaries
    All 33
    Developmental Gene Expression 2
    Gene Ontology 4
    Phenotypes 9
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory