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Mfsd13a Gene Detail
Summary
  • Symbol
    Mfsd13a
  • Name
    major facilitator superfamily domain containing 13a
  • Synonyms
    4930449A08Rik, 4930538D17Rik, Tmem180
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922396
    NCBI Gene: 75146
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:46345315-46363693 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 38.82 cM, cytoband D1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    630 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922396
 protein coding gene Chr19:46329560-46363693 (+)
129S1/SvImJ MGP_129S1SvImJ_G0025207
 protein coding gene Chr19:46041573-46060739 (+)
A/J MGP_AJ_G0025183
 protein coding gene Chr19:43775500-43794302 (+)
AKR/J MGP_AKRJ_G0025152
 protein coding gene Chr19:45196595-45214906 (+)
BALB/cJ MGP_BALBcJ_G0025178
 protein coding gene Chr19:43832539-43850539 (+)
C3H/HeJ MGP_C3HHeJ_G0024938
 protein coding gene Chr19:45360424-45378741 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025621
 protein coding gene Chr19:47189078-47209951 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023035
 protein coding gene Chr19:42996266-43031492 (+)
CAST/EiJ MGP_CASTEiJ_G0024403
 protein coding gene Chr19:45142616-45177648 (+)
CBA/J MGP_CBAJ_G0024918
 protein coding gene Chr19:49547741-49568756 (+)
DBA/2J MGP_DBA2J_G0025050
 protein coding gene Chr19:43596476-43614795 (+)
FVB/NJ MGP_FVBNJ_G0025011
 protein coding gene Chr19:43378445-43396091 (+)
LP/J MGP_LPJ_G0025136
 protein coding gene Chr19:45950019-45970544 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025042
 protein coding gene Chr19:48890177-48911288 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025679
 protein coding gene Chr19:45298454-45319600 (+)
PWK/PhJ MGP_PWKPhJ_G0024152
 protein coding gene Chr19:43543664-43562562 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023956
 protein coding gene Chr19:43935284-43971829 (+)
WSB/EiJ MGP_WSBEiJ_G0024473
 protein coding gene Chr19:45442304-45461723 (+)



Homology
more
  • Human Ortholog
    MFSD13A, major facilitator superfamily domain containing 13A
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MFSD13A, major facilitator superfamily domain containing 13A
  • Synonyms
    bA18I14.8, C10orf77, TMEM180
  • Links
    NCBI Gene ID: 79847
    neXtProt AC: NX_Q14CX5
    UniProt: Q14CX5

  • Chr Location
    10q24.32; chr10:102461395-102477045 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    756
  • Tissues
    5
  • cDNA Data
    29
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75146 NCBI Gene Model | MGI Sequence Detail 18379 C57BL/6J ±  kb
transcript NM_029186 RefSeq | MGI Sequence Detail 2280 Not Specified  
polypeptide Q6PDE8 UniProt | EBI | MGI Sequence Detail 519 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 31
    cDNA 30
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1921924
References
more
  • Summaries
    All 34
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:177709 Kooistra MK, et al., Strain-specific modifier genes of Cecr2-associated exencephaly in mice: genetic analysis and identification of differentially expressed candidate genes. Physiol Genomics. 2012 Jan 18;44(1):35-46
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory