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Zfp653 Gene Detail
Summary
  • Symbol
    Zfp653
  • Name
    zinc finger protein 653
  • Synonyms
    E430039K05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442362
    NCBI Gene: 319601
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:21966707-21982672 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 8.18 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    465 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442362
 protein coding gene Chr9:21966705-21982707 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034475
 protein coding gene Chr9:19342330-19358230 (-)
A/J MGP_AJ_G0034453
 protein coding gene Chr9:18959325-18975210 (-)
AKR/J MGP_AKRJ_G0034379
 protein coding gene Chr9:19325133-19341006 (-)
BALB/cJ MGP_BALBcJ_G0034444
 protein coding gene Chr9:18841363-18857216 (-)
C3H/HeJ MGP_C3HHeJ_G0034156
 protein coding gene Chr9:19633045-19649891 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034965
 protein coding gene Chr9:20113644-20129533 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031895
 protein coding gene Chr9:18060404-18076186 (-)
CAST/EiJ MGP_CASTEiJ_G0033479
 protein coding gene Chr9:19469904-19485373 (-)
CBA/J MGP_CBAJ_G0034129
 protein coding gene Chr9:20889093-20907315 (-)
DBA/2J MGP_DBA2J_G0034287
 protein coding gene Chr9:18923823-18939703 (-)
FVB/NJ MGP_FVBNJ_G0034230
 protein coding gene Chr9:18475117-18491131 (-)
LP/J MGP_LPJ_G0034373
 protein coding gene Chr9:19500459-19516165 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034274
 protein coding gene Chr9:22439119-22454809 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034985
 protein coding gene Chr9:19293422-19309282 (-)
PWK/PhJ MGP_PWKPhJ_G0033184
 protein coding gene Chr9:18931057-18946856 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033018
 protein coding gene Chr9:19325910-19341552 (-)
WSB/EiJ MGP_WSBEiJ_G0033594
 protein coding gene Chr9:19032746-19048461 (-)



Homology
more
  • Human Ortholog
    ZNF653, zinc finger protein 653
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZNF653, zinc finger protein 653
  • Synonyms
    E430039K05Rik, ZIP67
  • Links
    NCBI Gene ID: 115950
    neXtProt AC: NX_Q96CK0
    UniProt: Q96CK0

  • Chr Location
    19p13.2; chr19:11483427-11505839 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    17
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    738
  • Tissues
    23
  • cDNA Data
    32
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000038895 Ensembl Gene Model | MGI Sequence Detail 15966 C57BL/6J ±  kb
transcript ENSMUST00000179605 Ensembl | MGI Sequence Detail 1888 Not Applicable  
polypeptide ENSMUSP00000137064 Ensembl | MGI Sequence Detail 623 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 33
    cDNA 32
    Primer pair 1

    Microarray probesets 2
References
more
  • Summaries
    All 28
    Developmental Gene Expression 2
    Gene Ontology 7
    Phenotypes 2
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:140465 Guo G, et al., Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst. Dev Cell. 2010 Apr 20;18(4):675-85
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory