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1700030J22Rik Gene Detail
Summary
  • Symbol
    1700030J22Rik
  • Name
    RIKEN cDNA 1700030J22 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916778
    NCBI Gene: 69528
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:117696333-117705698 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 63.41 cM, cytoband E1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    377 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916778
 protein coding gene Chr8:117696333-117705741 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034168
 protein coding gene Chr8:120090109-120099455 (-)
A/J MGP_AJ_G0034148
 protein coding gene Chr8:115211679-115221023 (-)
AKR/J MGP_AKRJ_G0034075
 protein coding gene Chr8:118559504-118568847 (-)
BALB/cJ MGP_BALBcJ_G0034142
 protein coding gene Chr8:115405901-115415243 (-)
C3H/HeJ MGP_C3HHeJ_G0033853
 protein coding gene Chr8:119282408-119291786 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034662
 protein coding gene Chr8:124168113-124179334 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031604
 protein coding gene Chr8:108140685-108149839 (-)
CAST/EiJ MGP_CASTEiJ_G0033180
 protein coding gene Chr8:119102814-119114276 (-)
CBA/J MGP_CBAJ_G0033826
 protein coding gene Chr8:128648553-128657898 (-)
DBA/2J MGP_DBA2J_G0033982
 protein coding gene Chr8:114436595-114445940 (-)
FVB/NJ MGP_FVBNJ_G0033925
 protein coding gene Chr8:113412127-113421505 (-)
LP/J MGP_LPJ_G0034071
 protein coding gene Chr8:120221855-120232899 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033972
 protein coding gene Chr8:131244286-131256136 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034680
 protein coding gene Chr8:118649844-118659192 (-)
PWK/PhJ MGP_PWKPhJ_G0032882
 protein coding gene Chr8:114133693-114143304 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032722
 protein coding gene Chr8:117339804-117349922 (-)
WSB/EiJ MGP_WSBEiJ_G0033296
 protein coding gene Chr8:119359415-119368666 (-)



Homology
more
  • Human Ortholog
    C16orf46, chromosome 16 open reading frame 46
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C16orf46, chromosome 16 open reading frame 46
  • Links
    NCBI Gene ID: 123775
    neXtProt AC: NX_Q6P387
    UniProt: Q6P387

  • Chr Location
    16q23.2; chr16:81053497-81077267 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    18
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000031847 Ensembl Gene Model | MGI Sequence Detail 9366 C57BL/6J ±  kb
    transcript ENSMUST00000070577 Ensembl | MGI Sequence Detail 2976 Not Applicable  
    polypeptide ENSMUSP00000070601 Ensembl | MGI Sequence Detail 409 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 18
      cDNA 18

      Microarray probesets 4
    References
    more
    • Summaries
      All 29
      Gene Ontology 2
      Phenotypes 7
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/19/2024
    MGI 6.24     		The Jackson Laboratory