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Cnksr3 Gene Detail
Summary
  • Symbol
    Cnksr3
  • Name
    Cnksr family member 3
  • Synonyms
    Magi1, MGC:37681
  • Feature Type
    protein coding gene
  • IDs
    MGI:2674130
    NCBI Gene: 215748
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:7069063-7162237 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 1.85 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2919 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2674130
 protein coding gene Chr10:7069061-7162237 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016992
 protein coding gene Chr10:4278978-4377056 (-)
A/J MGP_AJ_G0016970
 protein coding gene Chr10:4086191-4182397 (-)
AKR/J MGP_AKRJ_G0016935
 protein coding gene Chr10:4146071-4243169 (-)
BALB/cJ MGP_BALBcJ_G0016928
 protein coding gene Chr10:4029161-4128606 (-)
C3H/HeJ MGP_C3HHeJ_G0016753
 protein coding gene Chr10:4285378-4381009 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017391
 protein coding gene Chr10:4423394-4530214 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015096
 protein coding gene Chr10:3692101-3786827 (-)
CAST/EiJ MGP_CASTEiJ_G0016335
 protein coding gene Chr10:4243886-4344283 (-)
CBA/J MGP_CBAJ_G0016725
 protein coding gene Chr10:4579594-4680349 (-)
DBA/2J MGP_DBA2J_G0016833
 protein coding gene Chr10:4035433-4128501 (-)
FVB/NJ MGP_FVBNJ_G0016828
 protein coding gene Chr10:3941409-4037114 (-)
LP/J MGP_LPJ_G0016908
 protein coding gene Chr10:4137124-4244883 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016858
 protein coding gene Chr10:4446101-4540540 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017428
 protein coding gene Chr10:4119408-4211775 (-)
PWK/PhJ MGP_PWKPhJ_G0016121
 protein coding gene Chr10:4003446-4094538 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015902
 protein coding gene Chr10:4331313-4427328 (-)
WSB/EiJ MGP_WSBEiJ_G0016397
 protein coding gene Chr10:4193466-4293026 (-)



Homology
more
  • Human Ortholog
    CNKSR3, CNKSR family member 3
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CNKSR3, CNKSR family member 3
  • Synonyms
    CNK3, CNK3/IPCEF1, MAGI1
  • Links
    NCBI Gene ID: 154043
    neXtProt AC: NX_Q6P9H4
    UniProt: Q6P9H4

  • Chr Location
    6q25.2; chr6:154387515-154510685 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    3
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    707
  • Tissues
    1
  • cDNA Data
    29
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000015202 Ensembl Gene Model | MGI Sequence Detail 93175 C57BL/6J ±  kb
transcript ENSMUST00000015346 Ensembl | MGI Sequence Detail 3447 Not Applicable  
polypeptide ENSMUSP00000015346 Ensembl | MGI Sequence Detail 555 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 29
    cDNA 29

    Microarray probesets 3
References
more
  • Summaries
    All 27
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 3
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
  • Latest
    J:205051 Miller JA, et al., Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates. Development. 2013 Nov;140(22):4633-44
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory