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Cnst Gene Detail
Summary
  • Symbol
    Cnst
  • Name
    consortin, connexin sorting protein
  • Synonyms
    9630058J23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2445141
    NCBI Gene: 226744
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:179374009-179455043 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 83.57 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2516 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2445141
 protein coding gene Chr1:179373935-179455043 (+)
129S1/SvImJ MGP_129S1SvImJ_G0016860
 protein coding gene Chr1:185914100-185996800 (+)
A/J MGP_AJ_G0016839
 protein coding gene Chr1:178432542-178517063 (+)
AKR/J MGP_AKRJ_G0016805
 protein coding gene Chr1:183748570-183826150 (+)
BALB/cJ MGP_BALBcJ_G0016797
 protein coding gene Chr1:179053310-179140881 (+)
C3H/HeJ MGP_C3HHeJ_G0016622
 protein coding gene Chr1:184479305-184560881 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017260
 protein coding gene Chr1:191935615-192016614 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014968
 protein coding gene Chr1:169425345-169506350 (+)
CAST/EiJ MGP_CASTEiJ_G0016203
 protein coding gene Chr1:183785668-183879648 (+)
CBA/J MGP_CBAJ_G0016596
 protein coding gene Chr1:199088679-199178710 (+)
DBA/2J MGP_DBA2J_G0016702
 protein coding gene Chr1:177268459-177351927 (+)
FVB/NJ MGP_FVBNJ_G0016698
 protein coding gene Chr1:175347686-175429049 (+)
LP/J MGP_LPJ_G0016776
 protein coding gene Chr1:187191343-187273634 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016729
 protein coding gene Chr1:206236748-206319547 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017297
 protein coding gene Chr1:183468330-183552439 (+)
PWK/PhJ MGP_PWKPhJ_G0015991
 protein coding gene Chr1:176350332-176431492 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015767
 protein coding gene Chr1:182430382-182516214 (+)
WSB/EiJ MGP_WSBEiJ_G0016266
 protein coding gene Chr1:183703491-183783850 (+)



Homology
more
  • Human Ortholog
    CNST, consortin, connexin sorting protein
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CNST, consortin, connexin sorting protein
  • Synonyms
    C1orf71, PPP1R64
  • Links
    NCBI Gene ID: 163882
    neXtProt AC: NX_Q6PJW8
    UniProt: Q6PJW8

  • Chr Location
    1q44; chr1:246566444-246668595 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    22
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    708
  • Tissues
    2
  • cDNA Data
    79
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 226744 NCBI Gene Model | MGI Sequence Detail 81035 C57BL/6J ±  kb
transcript NM_146105 RefSeq | MGI Sequence Detail 4568 C57BL/6  
polypeptide Q8CBC4 UniProt | EBI | MGI Sequence Detail 711 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 79
    cDNA 79

    Microarray probesets 3
References
more
  • Summaries
    All 35
    Developmental Gene Expression 2
    Gene Ontology 5
    Phenotypes 11
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:313619 Bedogni F, et al., Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Front Mol Neurosci. 2021;14:686034
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory