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Clasrp Gene Detail
Summary
  • Symbol
    Clasrp
  • Name
    CLK4-associating serine/arginine rich protein
  • Synonyms
    Sfrs16, Srsf16, SWAP2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1855695
    NCBI Gene: 53609
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:19314960-19338411 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 9.93 cM, cytoband A2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    585 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1855695
 protein coding gene Chr7:19314960-19338442 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031786
 protein coding gene Chr7:17609939-17637099 (-)
A/J MGP_AJ_G0031762
 protein coding gene Chr7:17228474-17253924 (-)
AKR/J MGP_AKRJ_G0031688
 protein coding gene Chr7:17706814-17733752 (-)
BALB/cJ MGP_BALBcJ_G0031767
 protein coding gene Chr7:17436098-17459405 (-)
C3H/HeJ MGP_C3HHeJ_G0031489
 protein coding gene Chr7:17970210-17996190 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032233
 protein coding gene Chr7:18476659-18501582 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029299
 protein coding gene Chr7:18876818-18900391 (-)
CAST/EiJ MGP_CASTEiJ_G0030833
 protein coding gene Chr7:14416289-14431738 (-)
CBA/J MGP_CBAJ_G0031451
 protein coding gene Chr7:19151385-19177653 (-)
DBA/2J MGP_DBA2J_G0031606
 protein coding gene Chr7:17181169-17204204 (-)
FVB/NJ MGP_FVBNJ_G0031558
 protein coding gene Chr7:17042136-17067602 (-)
LP/J MGP_LPJ_G0031689
 protein coding gene Chr7:17925034-17953966 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031594
 protein coding gene Chr7:18986021-19008950 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032261
 protein coding gene Chr7:17313783-17338088 (-)
PWK/PhJ MGP_PWKPhJ_G0030556
 protein coding gene Chr7:14277261-14301203 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030383
 protein coding gene Chr7:12020519-12044383 (-)
WSB/EiJ MGP_WSBEiJ_G0030932
 protein coding gene Chr7:17535016-17559492 (-)



Homology
more
  • Human Ortholog
    CLASRP, CLK4 associating serine/arginine rich protein
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CLASRP, CLK4 associating serine/arginine rich protein
  • Synonyms
    CLASP, SFRS16, SWAP2
  • Links
    NCBI Gene ID: 11129
    neXtProt AC: NX_Q8N2M8
    UniProt: Q8N2M8

  • Chr Location
    19q13.32; chr19:45039045-45070956 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    3
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    55
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000061028 Ensembl Gene Model | MGI Sequence Detail 23452 C57BL/6J ±  kb
transcript ENSMUST00000086041 Ensembl | MGI Sequence Detail 2180 Not Applicable  
polypeptide ENSMUSP00000083205 Ensembl | MGI Sequence Detail 668 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
  • Protein Ontology
    PR:000014754 CLK4-associating serine/arginine rich protein
    (term hierarchy)
  • InterPro Domains
    IPR040397 Suppressor of white apricot
    IPR019147 Suppressor of white apricot, N-terminal domain
  • GlyGen
    Q8CFC7 3 sites, 1 O-linked glycan (3 sites)
Molecular
Reagents
less
  • All nucleic 56
    cDNA 56

    Microarray probesets 3
References
more
  • Summaries
    All 33
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory