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Actl9 Gene Detail
Summary
  • Symbol
    Actl9
  • Name
    actin-like 9
  • Synonyms
    1700029I08Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916731
    NCBI Gene: 69481
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:33651873-33653242 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 17.98 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    136 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916731
 protein coding gene Chr17:33651870-33653242 (+)
129S1/SvImJ MGP_129S1SvImJ_G0023528
 protein coding gene Chr17:33348251-33349623 (+)
A/J MGP_AJ_G0023487
 protein coding gene Chr17:32206907-32208279 (+)
AKR/J MGP_AKRJ_G0023453
 protein coding gene Chr17:32570053-32571425 (+)
BALB/cJ MGP_BALBcJ_G0023491
 protein coding gene Chr17:32354701-32356073 (+)
C3H/HeJ MGP_C3HHeJ_G0023254
 protein coding gene Chr17:32920101-32921473 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023935
 protein coding gene Chr17:34567774-34569146 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021408
 protein coding gene Chr17:29734451-29735822 (+)
CAST/EiJ MGP_CASTEiJ_G0022756
 protein coding gene Chr17:33031557-33032929 (+)
CBA/J MGP_CBAJ_G0023230
 protein coding gene Chr17:35957836-35959208 (+)
DBA/2J MGP_DBA2J_G0023359
 protein coding gene Chr17:31598493-31599865 (+)
FVB/NJ MGP_FVBNJ_G0023328
 protein coding gene Chr17:31434029-31435401 (+)
LP/J MGP_LPJ_G0023437
 protein coding gene Chr17:33630463-33631835 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023348
 protein coding gene Chr17:35030922-35032294 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023975
 protein coding gene Chr17:32904989-32906361 (+)
PWK/PhJ MGP_PWKPhJ_G0022504
 protein coding gene Chr17:30486398-30487770 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022320
 protein coding gene Chr17:30881012-30882384 (+)
WSB/EiJ MGP_WSBEiJ_G0022815
 protein coding gene Chr17:32950017-32951389 (+)



Homology
more
  • Human Ortholog
    ACTL9, actin like 9
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ACTL9, actin like 9
  • Synonyms
    HSD21, SPGF53
  • Links
    NCBI Gene ID: 284382
    neXtProt AC: NX_Q8TC94
    UniProt: Q8TC94

  • Chr Location
    19p13.2; chr19:8697400-8698795 (-)  GRCh38
Human Diseases
more
  • Diseases
    1 with human ACTL9 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    4 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    5
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    9
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 69481 NCBI Gene Model | MGI Sequence Detail 1370 C57BL/6J ±  kb
transcript NM_183282 RefSeq | MGI Sequence Detail 1380 Not Specified  
polypeptide Q8CG27 UniProt | EBI | MGI Sequence Detail 415 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 4
Other
Accession IDs
less
MGI:2147026
References
more
  • Summaries
    All 26
    Gene Ontology 5
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory