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Hecw1 Gene Detail
Summary
  • Symbol
    Hecw1
  • Name
    HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
  • Synonyms
    E130207I19Rik, NEDL1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444115
    NCBI Gene: 94253
  • Alliance
    gene page
  • Transcription Start Sites
    9 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:14401023-14697813 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 5.29 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    8028 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444115
 protein coding gene Chr13:14401023-14697874 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020243
 protein coding gene Chr13:11195425-11504474 (-)
A/J MGP_AJ_G0020201
 protein coding gene Chr13:11117621-11418661 (-)
AKR/J MGP_AKRJ_G0020175
 protein coding gene Chr13:11242365-11556316 (-)
BALB/cJ MGP_BALBcJ_G0020187
 protein coding gene Chr13:11099777-11393343 (-)
C3H/HeJ MGP_C3HHeJ_G0019991
 protein coding gene Chr13:11407740-11712682 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020631
 protein coding gene Chr13:11785642-12126006 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018237
 protein coding gene Chr13:9839882-10115321 (-)
CAST/EiJ MGP_CASTEiJ_G0019524
 protein coding gene Chr13:11065632-11377645 (-)
CBA/J MGP_CBAJ_G0019955
 protein coding gene Chr13:12152309-12370048 (-)
DBA/2J MGP_DBA2J_G0020074
 protein coding gene Chr13:10759351-11064827 (-)
FVB/NJ MGP_FVBNJ_G0020055
 protein coding gene Chr13:10534752-10828962 (-)
LP/J MGP_LPJ_G0020144
 protein coding gene Chr13:11408207-11718072 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020092
 protein coding gene Chr13:12258280-12614363 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020658
 protein coding gene Chr13:11054560-11370006 (-)
PWK/PhJ MGP_PWKPhJ_G0019288
 protein coding gene Chr13:10856834-11149462 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019095
 protein coding gene Chr13:10217288-10526226 (-)
WSB/EiJ MGP_WSBEiJ_G0019586
 protein coding gene Chr13:11071897-11378275 (-)



Homology
more
  • Human Ortholog
    HECW1, HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    HECW1, HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
  • Synonyms
    NEDL1
  • Links
    NCBI Gene ID: 23072
    neXtProt AC: NX_Q76N89
    UniProt: Q76N89

  • Chr Location
    7p14.1-p13; chr7:43112629-43566001 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    875
  • Tissues
    106
  • cDNA Data
    25
  • Literature Summary
    7
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000021301 Ensembl Gene Model | MGI Sequence Detail 296791 C57BL/6J ±  kb
    transcript ENSMUST00000110516 Ensembl | MGI Sequence Detail 9460 Not Applicable  
    polypeptide ENSMUSP00000106145 Ensembl | MGI Sequence Detail 1604 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 31
      Genomic 4
      cDNA 25
      Primer pair 2

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGI:2137556, MGI:2442515
    References
    more
    • Summaries
      All 38
      Developmental Gene Expression 7
      Gene Ontology 4
      Phenotypes 7
    • Earliest
      J:70256 Martin N, et al., Genetic and physical delineation of the region overlapping the progressive motor neuropathy (pmn) locus on mouse chromosome 13. Genomics. 2001 Jul;75(1-3):9-16
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/19/2024
    MGI 6.24     		The Jackson Laboratory