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Mib2 Gene Detail
Summary
  • Symbol
    Mib2
  • Name
    mindbomb E3 ubiquitin protein ligase 2
  • Synonyms
    2210008I11Rik, Zzank1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2679684
    NCBI Gene: 76580
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:155739134-155753655 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 86.86 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    534 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2679684
 protein coding gene Chr4:155738925-155753711 (-)
129S1/SvImJ MGP_129S1SvImJ_G0029221
 protein coding gene Chr4:160004071-160024300 (-)
A/J MGP_AJ_G0029186
 protein coding gene Chr4:153276471-153291567 (-)
AKR/J MGP_AKRJ_G0029134
 protein coding gene Chr4:157442400-157457282 (-)
BALB/cJ MGP_BALBcJ_G0029202
 protein coding gene Chr4:153747719-153762231 (-)
C3H/HeJ MGP_C3HHeJ_G0028923
 protein coding gene Chr4:157988056-158003586 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029651
 protein coding gene Chr4:165686575-165701101 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026896
 protein coding gene Chr4:145565877-145581306 (-)
CAST/EiJ MGP_CASTEiJ_G0028335
 protein coding gene Chr4:155443803-155461125 (-)
CBA/J MGP_CBAJ_G0028885
 protein coding gene Chr4:170691330-170705837 (-)
DBA/2J MGP_DBA2J_G0029034
 protein coding gene Chr4:153296170-153310677 (-)
FVB/NJ MGP_FVBNJ_G0028997
 protein coding gene Chr4:152535937-152550460 (-)
LP/J MGP_LPJ_G0029124
 protein coding gene Chr4:159921136-159936026 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0029024
 protein coding gene Chr4:173503860-173518363 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029683
 protein coding gene Chr4:158069160-158086621 (-)
PWK/PhJ MGP_PWKPhJ_G0028056
 protein coding gene Chr4:149436452-149452541 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027890
 protein coding gene Chr4:152327873-152342476 (-)
WSB/EiJ MGP_WSBEiJ_G0028415
 protein coding gene Chr4:158239517-158254036 (-)



Homology
more
  • Human Ortholog
    MIB2, MIB E3 ubiquitin protein ligase 2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MIB2, MIB E3 ubiquitin protein ligase 2
  • Synonyms
    ZZANK1, ZZZ5
  • Links
    NCBI Gene ID: 142678
    neXtProt AC: NX_Q96AX9
    UniProt: Q96AX9

  • Chr Location
    1p36.33; chr1:1613731-1630605 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotypes from 3 alleles in 3 genetic backgrounds
    2 phenotypes from multigenic genotypes
    14 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele display exencephaly with a variable penetrance that depends on the genetic background. Mice homozygous for a reporter/null allele are viable, fertile and show normal growth, body weight and brain morphology.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    16
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    780
  • Tissues
    44
  • cDNA Data
    12
  • Literature Summary
    4
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000029060 Ensembl Gene Model | MGI Sequence Detail 14522 C57BL/6J ±  kb
    transcript ENSMUST00000103176 Ensembl | MGI Sequence Detail 3642 Not Applicable  
    polypeptide ENSMUSP00000099465 Ensembl | MGI Sequence Detail 921 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 19
      Genomic 1
      cDNA 13
      Primer pair 5

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:1923830
    References
    more
    • Summaries
      All 42
      Developmental Gene Expression 4
      Gene Ontology 7
      Phenotypes 14
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/19/2024
    MGI 6.24     		The Jackson Laboratory