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Sft2d2 Gene Detail
Summary
  • Symbol
    Sft2d2
  • Name
    SFT2 domain containing 2
  • Synonyms
    2010005O13Rik, cI-45
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917362
    NCBI Gene: 108735
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:165001906-165022007 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 72.51 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    774 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917362
 protein coding gene Chr1:165001906-165022104 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016689
 protein coding gene Chr1:170648022-170668640 (-)
A/J MGP_AJ_G0016670
 protein coding gene Chr1:163687433-163707564 (-)
AKR/J MGP_AKRJ_G0016636
 protein coding gene Chr1:168639440-168659540 (-)
BALB/cJ MGP_BALBcJ_G0016631
 protein coding gene Chr1:164176281-164196798 (-)
C3H/HeJ MGP_C3HHeJ_G0016455
 protein coding gene Chr1:168860102-168884263 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017092
 protein coding gene Chr1:176370383-176390487 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014801
 protein coding gene Chr1:155601860-155622248 (-)
CAST/EiJ MGP_CASTEiJ_G0016035
 protein coding gene Chr1:168488394-168509126 (-)
CBA/J MGP_CBAJ_G0016430
 protein coding gene Chr1:182645866-182665954 (-)
DBA/2J MGP_DBA2J_G0016536
 protein coding gene Chr1:162576438-162597499 (-)
FVB/NJ MGP_FVBNJ_G0016534
 protein coding gene Chr1:161031164-161052801 (-)
LP/J MGP_LPJ_G0016607
 protein coding gene Chr1:171719990-171740089 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016559
 protein coding gene Chr1:190153498-190173924 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017128
 protein coding gene Chr1:168491245-168511332 (-)
PWK/PhJ MGP_PWKPhJ_G0015821
 protein coding gene Chr1:161777985-161798794 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015608
 protein coding gene Chr1:167358568-167383082 (-)
WSB/EiJ MGP_WSBEiJ_G0016097
 protein coding gene Chr1:168651508-168671935 (-)



Homology
more
  • Human Ortholog
    SFT2D2, SFT2 domain containing 2
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SFT2D2, SFT2 domain containing 2
  • Synonyms
    dJ747L4.C1.2, UNQ512
  • Links
    NCBI Gene ID: 375035
    neXtProt AC: NX_O95562
    UniProt: O95562

  • Chr Location
    1q24.2; chr1:168225938-168253021 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    4
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    97
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000040848 Ensembl Gene Model | MGI Sequence Detail 20102 C57BL/6J ±  kb
transcript ENSMUST00000043338 Ensembl | MGI Sequence Detail 5535 Not Applicable  
polypeptide ENSMUSP00000043537 Ensembl | MGI Sequence Detail 159 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 97
    cDNA 97

    Microarray probesets 9
Other
Accession IDs
less
MGI:1930799, MGI:2138282
References
more
  • Summaries
    All 33
    Gene Ontology 4
    Phenotypes 5
  • Earliest
    J:66308 Takahashi Y, et al., Identification of cAMP analogue inducible genes in RAW264 macrophages. Biochim Biophys Acta. 2000 Jul 24;1492(2-3):385-94
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory